Recently we have shown that a very small anomalous diffraction signal (less than 0.5% of the total) of sulfur atoms, intrinsically present in all proteins can be succssfully used to solve crystal structures of proteins. This approach may become a routine technique in the practice olf macromolecular crystallography. The diffraction data to extremely high resolution of 0.65 angstrom were measured using synchrotron radiation, and the refined model reveals the unprecedented structgural details of the molecule of lysozyme. The structure of the single-stranded DNA-binding protein from T. aquaticus was solved showing that the two-OB domain subunit of this protein forms oligomers analogous to the more typical, single-domain SSBs from other bacteria. The crystal structure of the uropathogenic E. coli invasin DraD was solved and revealed the unusual self-complementing mwechanism of aggregation, utilized by the becteria in formation of invasive fibrils. We participated in several collaborative structural projects on various biologically important proteins, such as Nervy homology two domain or the argonaute protein.

Agency
National Institute of Health (NIH)
Institute
Division of Basic Sciences - NCI (NCI)
Type
Intramural Research (Z01)
Project #
1Z01BC010378-07
Application #
7338501
Study Section
Project Start
Project End
Budget Start
Budget End
Support Year
7
Fiscal Year
2006
Total Cost
Indirect Cost
Name
Basic Sciences
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Jaskolski, Mariusz; Gilski, Miroslaw; Dauter, Zbigniew et al. (2007) Stereochemical restraints revisited: how accurate are refinement targets and how much should protein structures be allowed to deviate from them? Acta Crystallogr D Biol Crystallogr 63:611-20
Meijers, Rob; Adolph, Hans-Werner; Dauter, Zbigniew et al. (2007) Structural evidence for a ligand coordination switch in liver alcohol dehydrogenase. Biochemistry 46:5446-54
Jedrzejczak, Robert; Dauter, Zbigniew; Dauter, Miroslawa et al. (2006) Structure of DraD invasin from uropathogenic Escherichia coli: a dimer with swapped beta-tails. Acta Crystallogr D Biol Crystallogr 62:157-64
Bielnicki, Jakub; Devedjiev, Yancho; Derewenda, Urszula et al. (2006) B. subtilis ykuD protein at 2.0 A resolution: insights into the structure and function of a novel, ubiquitous family of bacterial enzymes. Proteins 62:144-51
Sekar, K; Yogavel, M; Kanaujia, Shankar Prasad et al. (2006) Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A2. Acta Crystallogr D Biol Crystallogr 62:717-24
Liu, Yizhou; Cheney, Matthew D; Gaudet, Justin J et al. (2006) The tetramer structure of the Nervy homology two domain, NHR2, is critical for AML1/ETO's activity. Cancer Cell 9:249-60
Dauter, Zbigniew (2006) Estimation of anomalous signal in diffraction data. Acta Crystallogr D Biol Crystallogr 62:867-76
Sekar, K; Yogavel, M; Gayathri, D et al. (2006) Atomic resolution structure of the double mutant (K53,56M) of bovine pancreatic phospholipase A2. Acta Crystallogr Sect F Struct Biol Cryst Commun 62:1-5
Dauter, Zbigniew (2006) Current state and prospects of macromolecular crystallography. Acta Crystallogr D Biol Crystallogr 62:1-11
Serganov, Alexander; Keiper, Sonja; Malinina, Lucy et al. (2005) Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation. Nat Struct Mol Biol 12:218-24

Showing the most recent 10 out of 40 publications