The Program Project is focused on the development of integratable microfabricated DNA analysis components. This continuation proposal will develop nanoliter-scale DNA sample handling and analysis technologies for genotyping and for sequencing. The microfluidic, separation, and reaction components of genetic analysis are fabricated on silicon, glass, and/or polymer substrates. To optimize inexpensive design, testing, and production, the devices are made using photolithographic construction techniques. The proposal has three Program Project components, with the following goals: Project 1. Component Development and Refinement. Individual components are identified and are evaluated for suitability in an integrated system. Intensive engineering refinement occurs on a restricted number of component designs. Project 2. Advanced Component and Device Research. The basic engineering information required for advance optical detectors, microfluidic channels, novel fabrication methods, fluid control, surface interactions, and electrophoresis are obtained. Biological sample processing and DNA biochemistry procedures are developed for microscale integrated systems. Core Unit. Fabrication and Instrumentation Support. A central assembly and testing facility is maintained that can rapidly build and test prototypes and components for each of the projects. Experienced research engineers provide fabrication skills, knowledge, and training for the entire Program.

Agency
National Institute of Health (NIH)
Institute
National Human Genome Research Institute (NHGRI)
Type
Research Program Projects (P01)
Project #
5P01HG001984-06
Application #
6946755
Study Section
Special Emphasis Panel (ZHG1-HGR-N (M3))
Program Officer
Schloss, Jeffery
Project Start
1999-04-23
Project End
2007-08-31
Budget Start
2005-09-01
Budget End
2007-08-31
Support Year
6
Fiscal Year
2005
Total Cost
$1,155,451
Indirect Cost
Name
University of Michigan Ann Arbor
Department
Engineering (All Types)
Type
Schools of Engineering
DUNS #
073133571
City
Ann Arbor
State
MI
Country
United States
Zip Code
48109
Kim, Sung-Jin; Wang, Fang; Burns, Mark A et al. (2009) Temperature-programmed natural convection for micromixing and biochemical reaction in a single microfluidic chamber. Anal Chem 81:4510-6
Wang, Fang; Burns, Mark A (2009) Performance of nanoliter-sized droplet-based microfluidic PCR. Biomed Microdevices 11:1071-80
Rhee, Minsoung; Burns, Mark A (2009) Microfluidic pneumatic logic circuits and digital pneumatic microprocessors for integrated microfluidic systems. Lab Chip 9:3131-43
Wang, Fang; Yang, Ming; Burns, Mark A (2008) Microfabricated valveless devices for thermal bioreactions based on diffusion-limited evaporation. Lab Chip 8:88-97
Zeitoun, Ramsey I; Chen, Zheng; Burns, Mark A (2008) Transverse imaging and simulation of dsDNA electrophoresis in microfabricated glass channels. Electrophoresis 29:4768-74
Rhee, Minsoung; Burns, Mark A (2008) Microfluidic assembly blocks. Lab Chip 8:1365-73
Rhee, Minsoung; Burns, Mark A (2008) Drop mixing in a microchannel for lab-on-a-chip platforms. Langmuir 24:590-601
Srivastava, Nimisha; Burns, Mark A (2007) Microfluidic pressure sensing using trapped air compression. Lab Chip 7:633-7
Chang, Dustin S; Langelier, Sean M; Burns, Mark A (2007) An electronic Venturi-based pressure microregulator. Lab Chip 7:1791-9
Chisa, Jennifer L; Burke, David T (2007) Mammalian mRNA splice-isoform selection is tightly controlled. Genetics 175:1079-87

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