Abstract

Phosphotriesterase (PTE) is an enzyme from the soil bacteria Pseudomonas diminata that catalyzes the hydrolysis of a number of synthetic phosphotriesterase compounds used as insecticides and chemical warfare agents. T.S. Scanlan and R.C. Reid at UCSF have found that the translated sequence of an open reading frame (ORF) in E.coli is significantly homologous to the amino acid sequence of PTE, with 28% identity and 66% similarity over the entire sequence of the E.coli ORF. The three- dimensional structure of PTE has been solved, which provides a starting point to model Phosphotriesterase Homology Protein (PHP). The poject involves extensive molecular modeling of PHP and its probable active site using the facilities of the Computer Graphics Laboratory. These models may give us clues of PHP's natural function, which remains to be determined.

  Funding Agency

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR001081-22
Application #
6119149
Study Section
Project Start
1999-07-01
Project End
2000-06-30
Budget Start
1998-10-01
Budget End
1999-09-30
Support Year
22
Fiscal Year
1999
Total Cost
Indirect Cost

  Institution

Name
University of California San Francisco
Department
Type
DUNS #
073133571
City
San Francisco
State
CA
Country
United States
Zip Code
94143

  Publications

Kozak, John J; Gray, Harry B; Garza-López, Roberto A (2018) Relaxation of structural constraints during Amicyanin unfolding. J Inorg Biochem 179:135-145
Alamo, Lorenzo; Pinto, Antonio; Sulbarán, Guidenn et al. (2018) Lessons from a tarantula: new insights into myosin interacting-heads motif evolution and its implications on disease. Biophys Rev 10:1465-1477
Viswanath, Shruthi; Chemmama, Ilan E; Cimermancic, Peter et al. (2017) Assessing Exhaustiveness of Stochastic Sampling for Integrative Modeling of Macromolecular Structures. Biophys J 113:2344-2353
Chu, Shidong; Zhou, Guangyan; Gochin, Miriam (2017) Evaluation of ligand-based NMR screening methods to characterize small molecule binding to HIV-1 glycoprotein-41. Org Biomol Chem 15:5210-5219
Portioli, Corinne; Bovi, Michele; Benati, Donatella et al. (2017) Novel functionalization strategies of polymeric nanoparticles as carriers for brain medications. J Biomed Mater Res A 105:847-858
Alamo, Lorenzo; Koubassova, Natalia; Pinto, Antonio et al. (2017) Lessons from a tarantula: new insights into muscle thick filament and myosin interacting-heads motif structure and function. Biophys Rev 9:461-480
Nguyen, Hai Dang; Yadav, Tribhuwan; Giri, Sumanprava et al. (2017) Functions of Replication Protein A as a Sensor of R Loops and a Regulator of RNaseH1. Mol Cell 65:832-847.e4
Sofiyev, Vladimir; Kaur, Hardeep; Snyder, Beth A et al. (2017) Enhanced potency of bivalent small molecule gp41 inhibitors. Bioorg Med Chem 25:408-420
Grant, Oliver C; Tessier, Matthew B; Meche, Lawrence et al. (2016) Combining 3D structure with glycan array data provides insight into the origin of glycan specificity. Glycobiology 26:772-783
Bowen, Alice M; Jones, Michael W; Lovett, Janet E et al. (2016) Exploiting orientation-selective DEER: determining molecular structure in systems containing Cu(ii) centres. Phys Chem Chem Phys 18:5981-94

Showing the most recent 10 out of 508 publications