This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. Inflammatory and autoimmune diseases, such as asthma and rheumatoid arthritis, are characterized by the accumulation of immune cells that cause tissue damage in response to a complex array of secreted signaling molecules. Two cytokines thought to be critical mediators of inflammation are IL-1b and TNF-a. These cytokines exert distinct yet overlapping effects on target tissues, primarily by altering patterns of gene expression. IL-1b and TNF-a control gene expression by binding to distinct cell surface receptors, whereupon multiple protein kinase cascades are activated. We propose a pharmacological approach to study these complex signaling pathways. Our idea derives from the recent discovery that a marine natural product, ceratospongamide, potently inhibits gene expression induced by IL-1b with an IC50 of 32 nM. We seek to elucidate its mechanism of action. Ceratospongamide is a macrocyclic heptapeptide that is conformationally constrained by two additional rings (thiazole and oxazoline) formed by the cyclization of cysteine and threonine side chains onto the peptide backbone. We will synthesize ceratospongamide and derivatives that will enable the identification of its cellular targets. both radiolabeled and immobilized derivatives for affinity purification will be synthesized using modern synthetic methodology. Mass spectrometry measurements obtained at the UCSF Facility will be essential for two reasons: (1) characterizing synthetic intermediates and (2) identifying ceratospongamide's protein target.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR001614-24
Application #
7369043
Study Section
Special Emphasis Panel (ZRG1-BECM (02))
Project Start
2006-03-01
Project End
2007-02-28
Budget Start
2006-03-01
Budget End
2007-02-28
Support Year
24
Fiscal Year
2006
Total Cost
$1,682
Indirect Cost
Name
University of California San Francisco
Department
Pharmacology
Type
Schools of Pharmacy
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94143
MacRae, Andrew J; Mayerle, Megan; Hrabeta-Robinson, Eva et al. (2018) Prp8 positioning of U5 snRNA is linked to 5' splice site recognition. RNA 24:769-777
Katsuno, Yoko; Qin, Jian; Oses-Prieto, Juan et al. (2018) Arginine methylation of SMAD7 by PRMT1 in TGF-?-induced epithelial-mesenchymal transition and epithelial stem-cell generation. J Biol Chem 293:13059-13072
Sahoo, Pabitra K; Smith, Deanna S; Perrone-Bizzozero, Nora et al. (2018) Axonal mRNA transport and translation at a glance. J Cell Sci 131:
Tran, Vy M; Wade, Anna; McKinney, Andrew et al. (2017) Heparan Sulfate Glycosaminoglycans in Glioblastoma Promote Tumor Invasion. Mol Cancer Res 15:1623-1633
Liu, Tzu-Yu; Huang, Hector H; Wheeler, Diamond et al. (2017) Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics. Cell Syst 4:636-644.e9
Kintzer, Alexander F; Stroud, Robert M (2016) Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana. Nature 531:258-62
Bikle, Daniel D (2016) Extraskeletal actions of vitamin D. Ann N Y Acad Sci 1376:29-52
Twiss, Jeffery L; Fainzilber, Mike (2016) Neuroproteomics: How Many Angels can be Identified in an Extract from the Head of a Pin? Mol Cell Proteomics 15:341-3
Cil, Onur; Phuan, Puay-Wah; Lee, Sujin et al. (2016) CFTR activator increases intestinal fluid secretion and normalizes stool output in a mouse model of constipation. Cell Mol Gastroenterol Hepatol 2:317-327
Posch, Christian; Sanlorenzo, Martina; Vujic, Igor et al. (2016) Phosphoproteomic Analyses of NRAS(G12) and NRAS(Q61) Mutant Melanocytes Reveal Increased CK2? Kinase Levels in NRAS(Q61) Mutant Cells. J Invest Dermatol 136:2041-2048

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