This proposal investigates the mechanisms by which the retinoblastoma tumor suppressor protein (pRB) and two related proteins, p107 and p130, modulate transcription. The pRB family plays an important role in restraining cell proliferation, and mutations of pRB have been found in a variety of cancers. It is thought that these proteins suppress growth in part through an ability to regulate transcriptional activity of proteins to which they bind. We propose a biochemical approach toward studying the function of the pRB family of proteins. Our objectives include the following: (1) determining whether the pRB family targets proteins in the basal transcription machinery; (2) understanding how pRB can inhibit and activate transcription; and (3) understanding how the pRB-related proteins, p107 and p130, and p107/p130 complexes with cyclin-dependent kinases, modulate gene expression and growth. Each of these specific aims is part of an overall attempt to understand how certain critical cell cycle regulators modulate transcriptional responses during cell proliferation. These studies will be carried out using a mammalian in vitro transcription system reconstituted with purified basal and sequence- specific transcription factors and recombinant cell cycle proteins. The well-defined nature of these in vitro assays circumvents many of the complications of studying cell cycle-regulated events in vivo. In vivo growth suppression, protein-protein interaction assays, and DNA-binding analyses with purified or partially purified proteins will be used in parallel to confirm and strengthen our in vitro transcription results. Although much research has focused on the regulatory cues that promote cell growth, our understanding of the mechanisms that drive proliferation is still rudimentary. It is clear that a thorough knowledge of the interplay between gene expression and cell cycle regulatory proteins will be of fundamental importance in understanding the mechanisms for cell cycle progression in both normal and cancer cells.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA077245-04
Application #
6376660
Study Section
Molecular Biology Study Section (MBY)
Project Start
1998-06-19
Project End
2004-02-29
Budget Start
2001-04-01
Budget End
2002-03-31
Support Year
4
Fiscal Year
2001
Total Cost
$192,888
Indirect Cost
Name
Harvard University
Department
Microbiology/Immun/Virology
Type
Schools of Arts and Sciences
DUNS #
071723621
City
Cambridge
State
MA
Country
United States
Zip Code
02138
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Bowman, Christopher John; Ayer, Donald E; Dynlacht, Brian David (2014) Foxk proteins repress the initiation of starvation-induced atrophy and autophagy programs. Nat Cell Biol 16:1202-14
Vethantham, Vasupradha; Yang, Yan; Bowman, Christopher et al. (2012) Dynamic loss of H2B ubiquitylation without corresponding changes in H3K4 trimethylation during myogenic differentiation. Mol Cell Biol 32:1044-55
Li, Yirong; Zhang, David Y; Ren, Qinghu et al. (2012) Regulation of a novel androgen receptor target gene, the cyclin B1 gene, through androgen-dependent E2F family member switching. Mol Cell Biol 32:2454-66
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Bar-Joseph, Ziv; Siegfried, Zahava; Brandeis, Michael et al. (2008) Genome-wide transcriptional analysis of the human cell cycle identifies genes differentially regulated in normal and cancer cells. Proc Natl Acad Sci U S A 105:955-60

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