Ultrafast time-resolved near- and mid-IR spectroscopy will be employed to probe the structure, dynamics, and function of ligand- binding heme proteins. Transient IR spectra of photolyzed myoglobin (MbCO, MbNO, and Mb mutants recorded with less than 200 fs time resolution and with high sensitivity will reveal the orientation of ligands bound to and dissociated from the heme, the nature of ligand motion within the protein, the influence of solvent on protein and ligand dynamics, and the functional role of highly conserved residues in the protein. The incisive information about ligand orientation and motion afforded by this experimental approach allows detailed testing of structure-function hypotheses and molecular dynamics simulations and thereby probes the origins of molecular recognition and control. The orientation of ligands bound to and dissociated from the heme of myoglobin (Mb) in solution will be determined using the technique of photoselection spectroscopy. This technique, which has been successfully applied to CO, will be used to determine the orientation of bound NO and O2 and the orientation of NO dissociated from the heme of Mb. The influence of crystal packing forces on both ligand and protein dynamics will be probed. In addition, the influence of the solvent and its viscosity on both ligand and protein dynamics will be determined. The functional role of highly conserved residues in the vicinity of the ligand binding site in Mb will be explored by femtosecond time- resolved IR studies of MbCO mutants. Time-resolved IR studies will be extended to hemoglobin (Hb), a tetrameric allosteric protein.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
2R01DK045306-06
Application #
2410077
Study Section
Molecular and Cellular Biophysics Study Section (BBCA)
Program Officer
Laughlin, Maren R
Project Start
1992-09-30
Project End
1998-09-29
Budget Start
1997-09-30
Budget End
1998-09-29
Support Year
6
Fiscal Year
1997
Total Cost
Indirect Cost
Name
Harvard University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
071723621
City
Cambridge
State
MA
Country
United States
Zip Code
02138