The general goal of the proposed research is to understand the role of molecular dynamics in the function of membrane-bound enzymes. A large part of our effort is directed at the continuing development of instrumentation, experimental methodology, and theoretical analysis for the measurement of protein and lipid motion and spatial arrangements, by means of both magnetic resonance and optical spectroscopy. Electron paramagnetic resonance (EPR), both conventional and saturation transfer methods, will be used to study the orientation and rotational motion of spin-labeled proteins and lipids. Time-resolved phosphorescence will be used to study both rotational and translational diffusion, and intermolecular distances. We will use these methods primarily to probe the relationship between motion and function in the Ca-ATPase of sarcoplasmic reticulum (SR), the ATP-driven Ca++ pump that maintain's the Ca++ gradient necessary for muscle function. We will vary such parameters as lipid composition, lipid-to-protein ratio, temperature, and ion concentrations, correlating observed spectroscopic changes with changes in enzyme activity. In addition, the spectroscopic methods will be used to monitor molecular dynamics during enzyme action, to determine what motions may be coupled to function. We hope that these studies will help elucidate the molecular mechanism of action in this dynamic membrane system, and that the methods developed will stimulate similar progress in other systems.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM027906-06
Application #
3275132
Study Section
Biophysics and Biophysical Chemistry B Study Section (BBCB)
Project Start
1980-04-01
Project End
1986-03-31
Budget Start
1985-04-01
Budget End
1986-03-31
Support Year
6
Fiscal Year
1985
Total Cost
Indirect Cost
Name
University of Minnesota Twin Cities
Department
Type
Schools of Medicine
DUNS #
168559177
City
Minneapolis
State
MN
Country
United States
Zip Code
55455
Martin, Peter D; James, Zachary M; Thomas, David D (2018) Effect of Phosphorylation on Interactions between Transmembrane Domains of SERCA and Phospholamban. Biophys J 114:2573-2583
Stroik, Daniel R; Yuen, Samantha L; Janicek, Kevyn A et al. (2018) Targeting protein-protein interactions for therapeutic discovery via FRET-based high-throughput screening in living cells. Sci Rep 8:12560
Nelson, Sarah E D; Ha, Kim N; Gopinath, Tata et al. (2018) Effects of the Arg9Cys and Arg25Cys mutations on phospholamban's conformational equilibrium in membrane bilayers. Biochim Biophys Acta Biomembr 1860:1335-1341
Schaaf, Tory M; Peterson, Kurt C; Grant, Benjamin D et al. (2017) Spectral Unmixing Plate Reader: High-Throughput, High-Precision FRET Assays in Living Cells. SLAS Discov 22:250-261
Schaaf, Tory M; Peterson, Kurt C; Grant, Benjamin D et al. (2017) High-Throughput Spectral and Lifetime-Based FRET Screening in Living Cells to Identify Small-Molecule Effectors of SERCA. SLAS Discov 22:262-273
Rebbeck, Robyn T; Nitu, Florentin R; Rohde, David et al. (2016) S100A1 Protein Does Not Compete with Calmodulin for Ryanodine Receptor Binding but Structurally Alters the Ryanodine ReceptorĀ·Calmodulin Complex. J Biol Chem 291:15896-907
Autry, Joseph M; Thomas, David D; Espinoza-Fonseca, L Michel (2016) Sarcolipin Promotes Uncoupling of the SERCA Ca2+ Pump by Inducing a Structural Rearrangement in the Energy-Transduction Domain. Biochemistry 55:6083-6086
McCaffrey, Jesse E; James, Zachary M; Svensson, Bengt et al. (2016) A bifunctional spin label reports the structural topology of phospholamban in magnetically-aligned bicelles. J Magn Reson 262:50-56
Svensson, Bengt; Autry, Joseph M; Thomas, David D (2016) Molecular Modeling of Fluorescent SERCA Biosensors. Methods Mol Biol 1377:503-22
Espinoza-Fonseca, L Michel; Autry, Joseph M; Thomas, David D (2015) Sarcolipin and phospholamban inhibit the calcium pump by populating a similar metal ion-free intermediate state. Biochem Biophys Res Commun 463:37-41

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