Protein synthesis is dynamic, with rapid reductions in translation in response to many different environmental stresses. An important mechanism for this translational control involves GCN2 protein kinase phosphorylation of eIF2 (eIF2~P), a translation initiation factor that delivers initiator Met-tRNAi(Met) to the translation machinery during the initiation phase of protein synthesis. The ensuing reduction in global translation initiation conserves energy and provides time for cells to reprogram gene expression with a focus on stress alleviation. Accompanying this global translational control, eIF2~P selectively enhances the translation of genes, such as the mammalian transcription activator ATF4 (yeast counterpart GCN4), which are important for essential adaptive functions. The idea that ATF4 is a common downstream target that integrates signaling from GCN2, and other eIF2 kinases, has led to the eIF2~P/ATF4 pathway being collectively referred to as the Integrated Stress Response (ISR). The ISR serves essential adaptive functions; however, perturbations in or unabated induction of these stress responses can contribute to morbidity. Our studies are focused on understanding the molecular mechanisms regulating protein synthesis and stress response pathways and how these processes are beneficial or adverse in a given biomedical context. This research is important for understanding the progression of many diseases, including diabetes, cancer, and cardiovascular and neurodegenerative disorders, with a long term goal of development of biomarkers and therapeutic treatments. Our hypothesis is that GCN2 recognizes different stresses and facilitates gene expression that is important for ameliorating cellular damage and treating and preventing disease. In this proposal, we will address how GCN2 recognizes and gauges environmental stresses to elicit eIF2~P and translational control, and the underlying mechanism by which can recalibrate the protein synthetic machinery, such that mRNAs are individually evaluated, leading to prescribed changes in translation efficiencies. We propose three aims. 1) Characterize the mechanisms activating GCN2 in the ISR. 2) Characterize the mechanisms and functional significance of translational control in the ISR. 3) Characterize the role of the combined translational and transcriptional regulation of ATF4 in the ISR. Completion of the proposed experiments will provide significant new insight into the molecular processes activating GCN2 and the ISR, and the complex mechanisms by which eIF2~P controls global and gene- specific translation. These fundamental findings will be important for understanding how the ISR contributes to the progression of stress-related diseases, with the promise of developing new strategies for diagnosis and treatment.

Public Health Relevance

This proposal is focused on understanding the molecular mechanisms regulating protein synthesis and stress response pathways and how these processes are beneficial or adverse in a given biomedical context. This research is important for understanding the progression of many diseases, including diabetes, cancer, and cardiovascular and neurodegenerative disorders, with a long term goal of development of biomarkers and therapeutic treatments.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
3R01GM049164-21S1
Application #
9078147
Study Section
Molecular Genetics C Study Section (MGC)
Program Officer
Reddy, Michael K
Project Start
1993-04-01
Project End
2016-05-31
Budget Start
2014-05-01
Budget End
2016-05-31
Support Year
21
Fiscal Year
2015
Total Cost
$116,099
Indirect Cost
$40,771
Name
Indiana University-Purdue University at Indianapolis
Department
Biochemistry
Type
Schools of Medicine
DUNS #
603007902
City
Indianapolis
State
IN
Country
United States
Zip Code
46202
Collier, Ann E; Spandau, Dan F; Wek, Ronald C (2018) Translational control of a human CDKN1A mRNA splice variant regulates the fate of UVB-irradiated human keratinocytes. Mol Biol Cell 29:29-41
Al-Baghdadi, Rana J T; Nikonorova, Inna A; Mirek, Emily T et al. (2017) Role of activating transcription factor 4 in the hepatic response to amino acid depletion by asparaginase. Sci Rep 7:1272
Collier, Ann E; Wek, Ronald C; Spandau, Dan F (2017) Human Keratinocyte Differentiation Requires Translational Control by the eIF2? Kinase GCN2. J Invest Dermatol 137:1924-1934
Shao, Yu; Hernandez-Buquer, Selene; Childress, Paul et al. (2017) Improving Combination Osteoporosis Therapy in a Preclinical Model of Heightened Osteoanabolism. Endocrinology 158:2722-2740
Willy, Jeffrey A; Young, Sara K; Mosley, Amber L et al. (2017) Function of inhibitor of Bruton's tyrosine kinase isoform ? (IBTK?) in nonalcoholic steatohepatitis links autophagy and the unfolded protein response. J Biol Chem 292:14050-14065
Young, Sara K; Shao, Yu; Bidwell, Joseph P et al. (2016) Nuclear Matrix Protein 4 Is a Novel Regulator of Ribosome Biogenesis and Controls the Unfolded Protein Response via Repression of Gadd34 Expression. J Biol Chem 291:13780-8
Fusakio, Michael E; Willy, Jeffrey A; Wang, Yongping et al. (2016) Transcription factor ATF4 directs basal and stress-induced gene expression in the unfolded protein response and cholesterol metabolism in the liver. Mol Biol Cell 27:1536-51
Young, Sara K; Wek, Ronald C (2016) Upstream Open Reading Frames Differentially Regulate Gene-specific Translation in the Integrated Stress Response. J Biol Chem 291:16927-35
Young, Sara K; Palam, Lakshmi Reddy; Wu, Cheng et al. (2016) Ribosome Elongation Stall Directs Gene-specific Translation in the Integrated Stress Response. J Biol Chem 291:6546-58
Kwon, Jason J; Willy, Jeffrey A; Quirin, Kayla A et al. (2016) Novel role of miR-29a in pancreatic cancer autophagy and its therapeutic potential. Oncotarget 7:71635-71650

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