Sterol 14?-demethylase (CYP51) is the most widely distributed and perhaps the oldest of the >13,000 P450s known to date. This monooxygenase catalyzes a unique three step reaction (14?-methyl ->14?- alcohol->14?-aldehyde->14?-demethylated product plus formic acid) removing the 14?-methyl group from the initial cyclized intermediate in sterol biosynthesis, i.e. lanosterol in cholesterol biosynthesis. CYP51 is a drug target in eukaryotic pathogens because the reaction it catalyzes is essential for membrane formation and therefore loss of this activity is lethal. It has been studied extensively as a drug target in yeast and filamentous fungi where azoles that bind to the CYP heme iron have been found to be very effective drugs. Other eukaryotic human pathogens have not been studied in great detail and we have begun a detailed analysis of CYP51 in trypanosomes and leishmania, including whether it can serve as a drug target for killing these organisms which cause more than one hundred million deaths each year in the 'third world'and is becoming a serious global problem, mainly due to human migration and growing immunodeficiency. Our detailed investigation of CYP51 from Trypanosomatidae has been supported during the first two funding cycles of this grant, and during this current cycle we have also characterized novel chemical scaffolds which we believe are the basis of very efficient inhibitors of CYP51 from protozoa. This competing renewal application consists of three Specific Aims. First, is structure-based development of selective inhibitors for protozoan CYP51s. Here we will synthesize derivatives of the three original scaffolds we discovered (azole, pyridine and substrate based) and analyze the best of these derivatives in four test systems: protozoa themselves, human cells, human cells infected with protozoa and mouse models for Chagas disease. Second, we will test these scaffolds and their derivatives as potential drugs for treatment of infection by Candida albicans and Aspergillus (A) fumigatus and A. flavus. These fungi are highly pathogenic in humans, especially in immunocompromised patients, and after characterization by biochemistry and biophysics (including X-ray structure) of their CYP51s we will establish which scoffids and derivatives will be most effective for antifungal drug design. Third, we will compare structure-function characteristics of CYP51s from three different biological kingdoms (protozoa/fungi/human) to establish in detail the basis on which we can identify what features of both the enzymes and the inhibitors will lead to rational design of pathogen-selective drugs and drugs effective for CYP51-related azole resistance. Overall, the results arising from these studies will direct future approaches for drug development which will have major importance in global health.

Public Health Relevance

Sterol 14?-demethylases are major drug targets for treatment of fungal infections and are emerging targets for human trypanosomiasis and leishmaniasis. We have identified three novel CYP51 inhibitory scaffolds highly effective for Trypanosomatidae and determined crystal structures of CYP51s from three Trypanosomatidae pathogens (T. cruzi, T. brucei and L. infantum) in complexes with the inhibitors. This project is aimed at further development of our studies by determining X-ray structures of CYP51s from pathogenic fungi (Aspergillus fumigatus and Candida albicans) and use of the combined structure/function information for CYP51 structure- directed modifications of our new scaffolds into even better, pathogen-specific inhibitors which are also effective against drug-resistance.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM067871-09
Application #
8235706
Study Section
Xenobiotic and Nutrient Disposition and Action Study Section (XNDA)
Program Officer
Okita, Richard T
Project Start
2004-01-01
Project End
2015-12-31
Budget Start
2012-01-01
Budget End
2012-12-31
Support Year
9
Fiscal Year
2012
Total Cost
$357,979
Indirect Cost
$116,979
Name
Vanderbilt University Medical Center
Department
Biochemistry
Type
Schools of Medicine
DUNS #
004413456
City
Nashville
State
TN
Country
United States
Zip Code
37212
Yu, Xiaofeng; Nandekar, Prajwal; Mustafa, Ghulam et al. (2016) Ligand tunnels in T. brucei and human CYP51: Insights for parasite-specific drug design. Biochim Biophys Acta 1860:67-78
Hargrove, Tatiana Y; Friggeri, Laura; Wawrzak, Zdzislaw et al. (2016) Human sterol 14α-demethylase as a target for anticancer chemotherapy: towards structure-aided drug design. J Lipid Res 57:1552-63
Hoekstra, William J; Hargrove, Tatiana Y; Wawrzak, Zdzislaw et al. (2016) Clinical Candidate VT-1161's Antiparasitic Effect In Vitro, Activity in a Murine Model of Chagas Disease, and Structural Characterization in Complex with the Target Enzyme CYP51 from Trypanosoma cruzi. Antimicrob Agents Chemother 60:1058-66
Yu, Xiaofeng; Cojocaru, Vlad; Mustafa, Ghulam et al. (2015) Dynamics of CYP51: implications for function and inhibitor design. J Mol Recognit 28:59-73
Papadopoulou, Maria V; Bloomer, William D; Lepesheva, Galina I et al. (2015) Novel 3-nitrotriazole-based amides and carbinols as bifunctional antichagasic agents. J Med Chem 58:1307-19
Lepesheva, Galina I; Hargrove, Tatiana Y; Rachakonda, Girish et al. (2015) VFV as a New Effective CYP51 Structure-Derived Drug Candidate for Chagas Disease and Visceral Leishmaniasis. J Infect Dis 212:1439-48
Hargrove, Tatiana Y; Wawrzak, Zdzislaw; Lamb, David C et al. (2015) Structure-Functional Characterization of Cytochrome P450 Sterol 14α-Demethylase (CYP51B) from Aspergillus fumigatus and Molecular Basis for the Development of Antifungal Drugs. J Biol Chem 290:23916-34
Guedes-da-Silva, F H; Batista, D G J; da Silva, C F et al. (2015) Different Therapeutic Outcomes of Benznidazole and VNI Treatments in Different Genders in Mouse Experimental Models of Trypanosoma cruzi Infection. Antimicrob Agents Chemother 59:7564-70
Cherkesova, Tatiana S; Hargrove, Tatiana Y; Vanrell, M Cristina et al. (2014) Sequence variation in CYP51A from the Y strain of Trypanosoma cruzi alters its sensitivity to inhibition. FEBS Lett 588:3878-85
Friggeri, Laura; Hargrove, Tatiana Y; Rachakonda, Girish et al. (2014) Structural basis for rational design of inhibitors targeting Trypanosoma cruzi sterol 14α-demethylase: two regions of the enzyme molecule potentiate its inhibition. J Med Chem 57:6704-17

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