Neurulation is a complex and multi-step process that gives rise to the chordate central nervous system. Problems in neurulation are the source of some of the most common human birth defects. In this renewal application we are proposing to build on and extend findings from the current funding period that bring to light previously unknown gene functions in neural plate induction and neural tube closure. These discoveries were made using a novel forward genetic screen in the primitive chordate Ciona. The mutant line frimousse (frm) revealed a requirement for connexins (the subunit components of gap junctions) in maintenance of neural induction. In the absence of Ciona connexin-11, anterior neural plate derivatives are initially induced but then lose specification and take on an epidermal fate. A different mutant line, bugeye (bug), revealed a requirement for T-type Ca2+ channels in neural tube closure (NTC). In the absence of the T-type Ca2+ channel CAV3, neural induction and posterior NTC proceed normally, but the anterior neuropore fails to close completely and ultimately reopens, exposing the anterior brain. Knockdown of the orthologous gene product in Xenopus (CAV3.2) gave a nearly identical phenotype, indicating that the CAV3 requirement in NTC is ancient in the chordates. Other findings on bug point to a failure to properly down-regulate ephrinA signaling as a primary cause of the bug phenotype. Not only is ephrinA-d upregulated in the bug mutant, inhibition of EphrinA signaling with a dominant ephrin receptor (Eph3) rescues the bug phenotype. Proposed experiments will investigate the mechanism of CAV3 in NTC. We hypothesize that CAV3 plays a role in monitoring the morphogenetic events of NTC. Our present results also indicate the CAV3 operates by regulating levels of specific transcripts.
In Specific Aim 1, we will use RNA profiling to identify differentially expressed (DE) transcripts in bug versus wild type embryos. These DE transcripts will form the basis of investigation of transcriptional and post-transcriptional regulatory mechanisms. To test whether CAV3 signaling is linked to the events of NTC, rather than operating by autonomous program, we will disrupt closure and test for effects on Ca2+ transients in the neural tube and on target transcripts, including ephrinA-d.
In Specific Aim 2 we will continue to investigate the role of CAV3.2 in vertebrate NTC, and as an initial step we will work with the National Xenopus Resource to make a stable CAV3.2 knockout line. This knockout line will provide a tool for exploring, among other things, changes in cell adhesion in the closing anterior neuropore.
In Specific Aim 3, we will identify connexin genes expressed in the Xenopus neural plate and systematically knock them down to determine if the connexin requirement revealed by the frm mutant is conserved between higher and lower chordates. Finally we will continue to screen for new and informative mutants (Specific Aim 4).

Public Health Relevance

Neural tube closure defects, such as spina bifida, are among the most common human birth defects. This proposal will use animal models to investigate two newly discovered molecular regulators of central nervous system neural development and closure.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Research Project (R01)
Project #
5R01HD038701-18
Application #
9474643
Study Section
Development - 1 Study Section (DEV1)
Program Officer
Henken, Deborah B
Project Start
2000-04-01
Project End
2021-04-30
Budget Start
2018-05-01
Budget End
2019-04-30
Support Year
18
Fiscal Year
2018
Total Cost
Indirect Cost
Name
University of California Santa Barbara
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
094878394
City
Santa Barbara
State
CA
Country
United States
Zip Code
93106
Salas, Priscilla; Vinaithirthan, Vall; Newman-Smith, Erin et al. (2018) Photoreceptor specialization and the visuomotor repertoire of the primitive chordate Ciona. J Exp Biol 221:
Smith, William C (2018) Cellular Processes of Notochord Formation. Adv Exp Med Biol 1029:165-177
Spina, Elijah J; Guzman, Elmer; Zhou, Hongjun et al. (2017) A microRNA-mRNA expression network during oral siphon regeneration in Ciona. Development 144:1787-1797
Morales Diaz, Heidi; Mejares, Emil; Newman-Smith, Erin et al. (2016) ACAM, a novel member of the neural IgCAM family, mediates anterior neural tube closure in a primitive chordate. Dev Biol 409:288-296
Abdul-Wajid, Sarah; Morales-Diaz, Heidi; Khairallah, Stephanie M et al. (2015) T-type Calcium Channel Regulation of Neural Tube Closure and EphrinA/EPHA Expression. Cell Rep 13:829-839
Kourakis, Matthew J; Smith, William C (2015) An organismal perspective on C. intestinalis development, origins and diversification. Elife 4:
Abdul-Wajid, Sarah; Veeman, Michael T; Chiba, Shota et al. (2014) Exploiting the extraordinary genetic polymorphism of ciona for developmental genetics with whole genome sequencing. Genetics 197:49-59
Hackley, Christopher; Mulholland, Erin; Kim, Gil Jung et al. (2013) A transiently expressed connexin is essential for anterior neural plate development in Ciona intestinalis. Development 140:147-55
Veeman, Michael T; Chiba, Shota; Smith, William C (2011) Ciona genetics. Methods Mol Biol 770:401-22
Tresser, Jason; Chiba, Shota; Veeman, Michael et al. (2010) doublesex/mab3 related-1 (dmrt1) is essential for development of anterior neural plate derivatives in Ciona. Development 137:2197-203

Showing the most recent 10 out of 26 publications