The contractile interaction in the filament array of the muscle f fiber is complex, and the identification of unique model of this interaction will require a large amount of dat. We will measure actomyosin mechanics in permeable fibers and in single motor assays under a variety of conditions that are designed to provide data on the kinetics and energetics of this interaction. In one set of experiments we will measure the mechanics of fibers which have increased populations of cross-bridges in pre-power- stroke states. These states will be populated using a remarkable series of s substrate analogs that have been identified, which have graded efficacies for activating muscle fibers, and by analogs of phosphate. We will measure how rapidly cross-bridges in these states interact with actin, and we will investigate why some of these states present a drag on filament motion while others don't. We will use these analogs to determine which steps in the cycle limit the rate of force development. These steps will also be disected using photoactivatable phosphate to measure the rates associated with phosphate release in fibers, and by measuring the rates of the hydrolysis step and acto-S1 binding in solution. The studies of fiber mechanics will be complemented by measurements of the forces and displacements generated by single motor proteins activated in this series of analogs. These data will determine how a perturbation in the nucleotide-protein interaction affects the power-stroke. They will provide more definitive information on the states populated by the analogs and may define the relation between force and position within the powerstroke. In another set of experiments, photoactivatible nucleotide analogs that either don't generate force or generate little force will provide a measure of a single nucleotide turnover in an active fiber. The data will also help determine the fraction of myosin heads that are generating force, a parameter that remains controversial and which is important for the interpretation of both mechanical and structural studies. Recently we have developed techniques that allow us to obtain reproducible data from fibers that are activated at higher temperatures 15-35 degrees C, and have shown that changes in pH have a different effect at higher temperatures. We will complete our characterization of fiber mechanics, investigating the effects of increased phosphate, increased [ADP] and decreased [ATP]. These studies will also provide additional data defining cross-bridge kinetics, contributing to the long term goal of this grant, which is to explain the complex physiological behaviour of active muscle fibers in terms of the kinetics and energetics of the actomyosin interaction.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Project (R01)
Project #
5R01HL032145-11
Application #
2378714
Study Section
Special Emphasis Panel (ZRG2-PHY (02))
Project Start
1984-05-01
Project End
1999-02-28
Budget Start
1997-03-01
Budget End
1998-02-28
Support Year
11
Fiscal Year
1997
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Biochemistry
Type
Schools of Medicine
DUNS #
073133571
City
San Francisco
State
CA
Country
United States
Zip Code
94143
Purcell, Thomas J; Naber, Nariman; Franks-Skiba, Kathy et al. (2011) Nucleotide pocket thermodynamics measured by EPR reveal how energy partitioning relates myosin speed to efficiency. J Mol Biol 407:79-91
Hooijman, Pleuni; Stewart, Melanie A; Cooke, Roger (2011) A new state of cardiac myosin with very slow ATP turnover: a potential cardioprotective mechanism in the heart. Biophys J 100:1969-76
Purcell, Thomas J; Naber, Nariman; Sutton, Shirley et al. (2011) EPR spectra and molecular dynamics agree that the nucleotide pocket of myosin V is closed and that it opens on binding actin. J Mol Biol 411:16-26
Naber, Nariman; Cooke, Roger; Pate, Edward (2011) Slow myosin ATP turnover in the super-relaxed state in tarantula muscle. J Mol Biol 411:943-50
Naber, Nariman; Málnási-Csizmadia, András; Purcell, Thomas J et al. (2010) Combining EPR with fluorescence spectroscopy to monitor conformational changes at the myosin nucleotide pocket. J Mol Biol 396:937-48
Stewart, Melanie A; Franks-Skiba, Kathleen; Chen, Susan et al. (2010) Myosin ATP turnover rate is a mechanism involved in thermogenesis in resting skeletal muscle fibers. Proc Natl Acad Sci U S A 107:430-5
Stewart, Melanie; Franks-Skiba, Kathy; Cooke, Roger (2009) Myosin regulatory light chain phosphorylation inhibits shortening velocities of skeletal muscle fibers in the presence of the myosin inhibitor blebbistatin. J Muscle Res Cell Motil 30:17-27
Cooke, Roger (2007) Modulation of the actomyosin interaction during fatigue of skeletal muscle. Muscle Nerve 36:756-77
Franks-Skiba, Kathleen; Lardelli, Rea; Goh, Germaine et al. (2007) Myosin light chain phosphorylation inhibits muscle fiber shortening velocity in the presence of vanadate. Am J Physiol Regul Integr Comp Physiol 292:R1603-12
Karatzaferi, Christina; Chinn, Marc K; Cooke, Roger (2004) The force exerted by a muscle cross-bridge depends directly on the strength of the actomyosin bond. Biophys J 87:2532-44

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