Voltage-gated potassium channels regulate the electrical activity of excitable cells, such as nerve and muscle cells, by gating open a potassium channel conductance in response to increased electrical activity in the cell. Because potassium is high inside the cell, the loss of potassium ions through this pore makes the inside of the cell more negative, inhibiting further electrical activity. Problems in potassium channels have been linked to numerous diseases, including: cardiac arrhythmias, epilepsy, and electrical rhythm disturbances. Drugs targeting potassium channels are used to treat a variety of disorders including hypertension, multiple sclerosis, and diabetes. In addition, the structure of potassium channels are similar to other ion channels, such as sodium and calcium channels. In this study we are continuing our investigation into the question of what unique properties are encoded in the different families of potassium channels. These studies are revealing how specific domains on the cytoplasmic surfaces of the channels are involved in the regulation of channel assembly, function, and the interactions with other cellular signaling systems.
In Specific Aim 1, we will continue our studies determining the structures of these channels by completing the structural determination of the cytoplasmic N-terminus of a Shaker type potassium channel, and determining how other proteins interact with this structure.
In Specific Aim 2, we will move our focus to the full length channel to determine how the cytoplasmic N-terminus is integrated into the full channel, and whether the structure of the cytoplasmic N-terminus is coupled to channel gating status. Finally,.
In Specific Aim 3 will examine what the role of Zn2+ ions is in non-Shaker type potassium channels. The presence of a structural Zn2+ ion is one striking difference between non-Shaker potassium channels and Shaker type channels. Our studies will determine what the role of this Zn2+ ion is in these channels. By completing these studies we will significantly extend our understanding of the structures of voltage-gated potassium channels, and their roles as part of the cell biology of excitable cells.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Project (R01)
Project #
5R01NS031583-09
Application #
6477338
Study Section
Special Emphasis Panel (ZRG1-MDCN-3 (01))
Program Officer
Stewart, Randall
Project Start
1993-05-01
Project End
2004-11-30
Budget Start
2001-12-01
Budget End
2002-11-30
Support Year
9
Fiscal Year
2002
Total Cost
$375,000
Indirect Cost
Name
Baylor College of Medicine
Department
Neurosciences
Type
Schools of Medicine
DUNS #
074615394
City
Houston
State
TX
Country
United States
Zip Code
77030
Kunjilwar, Kumud; Qian, Yan; Pfaffinger, Paul J (2013) Functional stoichiometry underlying KChIP regulation of Kv4.2 functional expression. J Neurochem 126:462-72
Prince-Carter, Alison; Pfaffinger, Paul J (2009) Multiple intermediate states precede pore block during N-type inactivation of a voltage-gated potassium channel. J Gen Physiol 134:15-34
Lauver, Aaron; Yuan, Li-Lian; Jeromin, Andreas et al. (2006) Manipulating Kv4.2 identifies a specific component of hippocampal pyramidal neuron A-current that depends upon Kv4.2 expression. J Neurochem 99:1207-23
Wang, Guangyu; Shahidullah, Mohammad; Rocha, Carmen A et al. (2005) Functionally active t1-t1 interfaces revealed by the accessibility of intracellular thiolate groups in kv4 channels. J Gen Physiol 126:55-69
Jerng, Henry H; Kunjilwar, Kumud; Pfaffinger, Paul J (2005) Multiprotein assembly of Kv4.2, KChIP3 and DPP10 produces ternary channel complexes with ISA-like properties. J Physiol 568:767-88
Jerng, Henry H; Qian, Yan; Pfaffinger, Paul J (2004) Modulation of Kv4.2 channel expression and gating by dipeptidyl peptidase 10 (DPP10). Biophys J 87:2380-96
Jerng, Henry H; Pfaffinger, Paul J; Covarrubias, Manuel (2004) Molecular physiology and modulation of somatodendritic A-type potassium channels. Mol Cell Neurosci 27:343-69
Zhou, Wei; Qian, Yan; Kunjilwar, Kumud et al. (2004) Structural insights into the functional interaction of KChIP1 with Shal-type K(+) channels. Neuron 41:573-86
Kunjilwar, Kumud; Strang, Candace; DeRubeis, David et al. (2004) KChIP3 rescues the functional expression of Shal channel tetramerization mutants. J Biol Chem 279:54542-51
Nanao, Max H; Zhou, Wei; Pfaffinger, Paul J et al. (2003) Determining the basis of channel-tetramerization specificity by x-ray crystallography and a sequence-comparison algorithm: Family Values (FamVal). Proc Natl Acad Sci U S A 100:8670-5

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