Public Health Relevance

Project Summary/Abstract The aim of this proposal is to identify and characterize novel long noncoding RNAs (lncRNAs) that function to control inflammation and viability in macrophages. Macrophages are critical effector cells of the innate immune system where they function to control infection and maintain tissue homeostasis. In Aim 1 we will perform an unbiased screen to knockdown all lncRNAs in human or murine macrophages using CRISPRi technology and determine those that function to control NF?B, the master regulator of inflammatory genes. In Aim 2 of this proposal we will identify all lncRNAs required for macrophage viability in humans and mice. We will determine the mechanism of actions of our top conserved candidates. This proposal will allow for rapid meaningful data on the role that lncRNAs play in macrophage biology to be obtained in a highly efficient manner.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Exploratory/Developmental Grants (R21)
Project #
1R21AI142165-01A1
Application #
9824104
Study Section
Innate Immunity and Inflammation Study Section (III)
Program Officer
Vazquez-Maldonado, Nancy
Project Start
2019-07-01
Project End
2021-06-30
Budget Start
2019-07-01
Budget End
2020-06-30
Support Year
1
Fiscal Year
2019
Total Cost
Indirect Cost
Name
University of California Santa Cruz
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
125084723
City
Santa Cruz
State
CA
Country
United States
Zip Code
95064