Almost 10% of all newly diagnosed cancer cases in the US are cancers of the blood. Moreover, for children and young adults, blood cancer is the leading cause of cancer mortality. Leukemia is a cancer of developing progenitor blood cells, and the most common subtype of leukemia in pediatric patients is the precursor B-cell acute lymphoblastic leukemia (pre-B ALL) subtype. The transcription factor Ikaros is a critical regulator of lymphoid development and is recognized as an important tumor suppressor in pre-B ALL. Ikaros is deleted or mutated in over 80% of BCR-ABL1+ (Ph+) pre-B ALL and Ikaros mutations are associated with a poor prognosis in other subtypes of pre-B ALL. However, there is a critical gap in our understanding of how Ikaros exerts it important tumor suppressor role in leukemia, and there are currently no therapies available that target Ikaros loss-of-function in pre-B ALL. Our overall hypothesis is that non-coding RNA expression is linked to leukemia and that a major role of Ikaros as a tumor suppressor is to regulate leukemia-associated non-coding RNA gene expression. Accordingly, our experiments are designed to map the non-coding RNAs of pre-B ALL and to define the direct regulatory gene targets of Ikaros in order to better understand its tumor suppressor function. These results will be used to elucidate mechanisms of leukemogenesis and will provide an important model for testing new therapies for children affected by high-risk B-ALL.

Public Health Relevance

Leukemia is cancer of developing blood cells, and it is the leading cause of cancer mortality among children and young adults. Ikaros is an important tumor suppressor in some leukemia subtypes, and Ikaros mutations are associated with a poor prognosis. The goals of this research are to increase our understanding of how Ikaros function as a tumor suppressor and to provide new strategies for the diagnosis and treatment for patients with this poor outcome Ikaros-mutated leukemia.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Exploratory/Developmental Grants (R21)
Project #
1R21CA209229-01
Application #
9178353
Study Section
Special Emphasis Panel (ZCA1-SRB-J (M1))
Program Officer
Jhappan, Chamelli
Project Start
2016-07-09
Project End
2018-06-30
Budget Start
2016-07-09
Budget End
2017-06-30
Support Year
1
Fiscal Year
2016
Total Cost
$235,196
Indirect Cost
$84,401
Name
University of California San Francisco
Department
Pathology
Type
Schools of Medicine
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94118
Katerndahl, Casey D S; Heltemes-Harris, Lynn M; Willette, Mark J L et al. (2017) Antagonism of B cell enhancer networks by STAT5 drives leukemia and poor patient survival. Nat Immunol 18:694-704
Schjerven, Hilde; Ayongaba, Etapong F; Aghajanirefah, Ali et al. (2017) Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre-B ALL. J Exp Med 214:793-814