Invasive aspergillosis (IA), caused by the fungus Aspergillus fumigatus, is associated with mortality rates of 40- 50%. In response to the lack of effective treatments, the Infectious Diseases Society of America highlighted A. fumigatus as one of only six pathogens for which it mandated that a substantive breakthrough is urgently needed. IA accounts for the largest financial burden of all invasive fungal infections, with an annual economic cost in the United States of over $1.1 billion. Driven by the growing immunosuppressed patient population, both the incidence and mortality due to A. fumigatus have risen three-fold in the last decade. While much is known regarding the cellular processes required for fungal pathogenesis, translating understanding into tangible clinical benefit has been difficult due to the fact that these fungal pathogens and their hosts have similar physiology. As a result, current antifungal agents have limited clinical efficacy, are poorly fungicidal in the host, are occasionally toxic, and are increasingly ineffective due to emerging resistance. Thus, innovative antifungal targeting agents and strategies are critically needed. It has been well established that molecules targeting fungal calcineurin (FC) have extremely potent antifungal activity against a broad range of fungi. Our collaborator at Duke University, Dr. William Steinbach, MD, has established that calcineurin is required for A. fumigatus hyphal growth and virulence. Moreover, calcineurin is required for fungal stress response and small molecule or genetic inhibition of calcineurin thwarts drug resistance. The challenge of exploiting FC as an antifungal agent is due to structural and sequence homology with human calcineurin (HC). Knowledge of the HC pathway and the immunosuppressive capacity of calcineurin inhibition has been one of the greatest contributions to our current solid organ and bone marrow transplantation abilities. However, inhibition of HC causes severe immunosuppression and toxicity. Recent chemical innovations have enabled Amplyx to rapidly create libraries of analogues of FK506 that were previously synthetically intractable to design and test specific FC inhibitors. Moreover, we have recently solved the X-ray structure of A. fumigatus calcineurin. allowing unprecedented structural insight to help guide our development efforts. Amplyx has established that inhibitors of FC are well tolerated in vivo at doses that provide a therapeutic benefit in an animal model of IA. To further develop this project we propose the following Aims:
Aim 1. Design and synthesize a first generation library of 25 analogues of current hit compounds.
Aim 2. Assess compounds for advancement employing in vitro studies.
Aim 3. Characterize and select compounds for advancement employing in vivo studies.

Public Health Relevance

Mortality rates due to infections caused by the pathogenic fungus, Aspergillus fumigatus, are 40-50% and there is an urgent need for more effective therapeutics. The estimated annual healthcare cost due to these infections is over $1.1 billion in the United States. Amplyx proposes to create a new class of antifungal drugs to improve treatment outcomes.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Small Business Innovation Research Grants (SBIR) - Phase II (R44)
Project #
2R44AI106235-03
Application #
8906431
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Franceschi, Francois J
Project Start
2013-07-18
Project End
2017-06-30
Budget Start
2015-07-01
Budget End
2016-06-30
Support Year
3
Fiscal Year
2015
Total Cost
Indirect Cost
Name
Amplyx Pharmaceuticals, Inc.
Department
Type
DUNS #
780230004
City
San Diego
State
CA
Country
United States
Zip Code
92121
Nambu, Mitchell; Covel, Jonathan A; Kapoor, Mili et al. (2017) A calcineurin antifungal strategy with analogs of FK506. Bioorg Med Chem Lett 27:2465-2471