In the US, an estimated 1.2 million people are living with the Human Immunodeficiency virus (HIV). In spite of considerable progress, anti-retroviral therapy (ART) remains the only treatment option. The long-term success of ART is dependent on identification of new drugs against novel therapeutic targets due to toxicity of current drugs and emergence of ART-resistant viruses. Thus there is a critical need for continued development of compounds directed against novel viral and cellular targets. HIV-1 capsid protein (CA) has emerged as an important and legitimate therapeutic target that is currently clinically unexploited. CA is the primary structural protein of HIV and plays a critical role in both late and early stages of the viral replication cycle. While it is well established that the CA is involved in reverse transcription and nuclear entry, there is indirect evidence on the effects of CA in HIV-1 integration. This proposal will generate new knowledge on the mechanism by which CA regulates HIV-1 integration, thus facilitating antiviral drug development. The overall goal of this proposal is to understand the biochemical basis underlying the role of HIV-1 CA in viral integration. HIV enters the target cell by fusion of the viral membrane with the cellular membrane, releasing the viral core into the cytoplasm of the target cell. The HIV-1 core consists of the genomic RNA and associated viral proteins encased by the conical viral capsid. Functional studies of HIV-1 variants indicate that the proper assembly, morphology, and stability of the capsid core are all essential for HIV-1 infectivity. HIV-1 capsid (CA) is also now established to be a key determinant of the ability of HIV-1 to infect non-dividing cells. In particular, CA is genetically and functionally implicated in nuclear import of the reverse transcribed provirus, by mediating interactions with cellular transport factors. A key knowledge gap in the early stages of HIV-1 infection is the role of CA in viral integration. This proposal will span this knowledge gap through three specific aims.
Aim 1 : To define the effects of capsid stability on HIV-1 preintegration complex (PIC) activity and viral DNA integrity.
Aim 2 : To determine whether integration activity is dependent on CA levels in the PICs.
Aim 3 : To interrogate whether remodeling of the PICs by CA targeting host factors alter integration activity. Results from this proposal will significantly improve our understanding of CA?s role in HIV-1 integration and facilitate development of novel anti-viral therapy.

Public Health Relevance

The HIV-1 capsid is an emerging anti-viral drug target that is clinically not exploited. The overall goal of this application is to dissect the mechanism by which viral capsid controls HIV-1 integration and discover new knowledge that will promote anti-viral drug development.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
High Priority, Short Term Project Award (R56)
Project #
1R56AI122960-01A1
Application #
9313360
Study Section
AIDS Molecular and Cellular Biology Study Section (AMCB)
Program Officer
Lawrence, Diane M
Project Start
2016-07-26
Project End
2017-06-30
Budget Start
2016-07-26
Budget End
2017-06-30
Support Year
1
Fiscal Year
2016
Total Cost
$376,325
Indirect Cost
$97,825
Name
Meharry Medical College
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
041438185
City
Nashville
State
TN
Country
United States
Zip Code
37208
Dash, Sabyasachi; Balasubramaniam, Muthukumar; Dash, Chandravanu et al. (2018) Biotin-based Pulldown Assay to Validate mRNA Targets of Cellular miRNAs. J Vis Exp :
Dong, Xin-Hong; Ho, Meng-Hsuan; Liu, Bindong et al. (2018) Role of Porphyromonas gingivalis outer membrane vesicles in oral mucosal transmission of HIV. Sci Rep 8:8812
Balasubramaniam, Muthukumar; Zhou, Jing; Addai, Amma et al. (2018) PF74 Inhibits HIV-1 Integration by Altering The Composition of the Preintegration Complex. J Virol :
Balasubramaniam, Muthukumar; Pandhare, Jui; Dash, Chandravanu (2018) Are microRNAs Important Players in HIV-1 Infection? An Update. Viruses 10:
Welch, Jennifer L; Madison, Marisa N; Margolick, Joseph B et al. (2017) Effect of prolonged freezing of semen on exosome recovery and biologic activity. Sci Rep 7:45034
Dash, Sabyasachi; Balasubramaniam, Muthukumar; Rana, Tanu et al. (2017) Poly (ADP-Ribose) Polymerase-1 (PARP-1) Induction by Cocaine Is Post-Transcriptionally Regulated by miR-125b. eNeuro 4:
Balasubramaniam, Muthukumar; Davids, Benem; Addai, Amma B et al. (2017) Measurement of In Vitro Integration Activity of HIV-1 Preintegration Complexes. J Vis Exp :