This is a proposal for a multi-institutional MIDAS Center of Excellence called the Center for Statistics and Quantitative Infectious Diseases (CSQUID). The mission the Center is to provide national and international leadership. The lead institution is the Fred Hutchinson Cancer Research Center (FHCRC). Other participating institutions are the University of Florida, Northeastern University, University of Michigan, Emory University, University of Washington (UW), University of Georgia, and Duke University. The proposal includes four synergistic research projects (RP) that will develop cutting-edge methodologies applied to solving epidemiologic, immunologic and evolutionary problems important for public health policy in influenza, dengue, polio, TB, and other infectious agents: RP1: Modeling, Spatial, Statistics (Lead: I. Longini, U. Florida);RP2: Dynamic Inference (Lead: P. Rohani, U Michigan);RP 3: Understanding transmission with integrated genetic and epidemiologic inference (Co-Leads: E. Kenah, U Florida and T. Bedford, FHCRC);RP 4: Dynamics and Evolution of Influenza Strain Variation (Lead: R. Antia, Emory U). The Software Development and Core Facilities (Lead: A. Vespignani, Northeastern U) will provide leadership in software development, access, and communication. The Policy Studies (Lead: J. Koopman, U Michigan) will provide leadership in communication of our research results to policy makers, as well as conducting novel research into policy making. The Training, Outreach, and Diversity Plans include ongoing training of 9 postdoctoral fellows and 5.25 predoctoral research assistants each year, support for participants in the Summer Institute for Statistics and Modeling in Infectious Diseases (UW) and ongoing Research Experience for Undergraduates programs at two institutions, among others. All participating institutions and the Center are committed to increasing diversity at all levels. Center-wide activities include Career Development Awards for junior faculty, annual workshops and symposia, outside speakers, and participation in the MIDAS Network meetings. Scientific leadership will be provided by the Center Director, a Leadership Committee, an external Scientific Advisory Board as well as the MIDAS Steering Committee.

Public Health Relevance

This multi-institutional MIDAS Center of Excellence provides a multi-disciplinary approach to computational, statistical, and mathematical modeling of important infectious diseases. The research is motivated by multiscale problems such as immunologic, epidemiologic, and environmental drivers of the spread of infectious diseases with the goal of understanding and communicating the implications for public health policy.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Specialized Center--Cooperative Agreements (U54)
Project #
1U54GM111274-01
Application #
8753460
Study Section
Special Emphasis Panel (ZGM1-BBCB-5 (MI))
Program Officer
Sheeley, Douglas
Project Start
2014-09-12
Project End
2019-06-30
Budget Start
2014-09-12
Budget End
2015-06-30
Support Year
1
Fiscal Year
2014
Total Cost
$2,500,411
Indirect Cost
$659,637
Name
Fred Hutchinson Cancer Research Center
Department
Type
DUNS #
078200995
City
Seattle
State
WA
Country
United States
Zip Code
98109
Tsang, Tim K; Chen, Tian-Mu; Longini Jr, Ira M et al. (2018) Transmissibility of Norovirus in Urban Versus Rural Households in a Large Community Outbreak in China. Epidemiology 29:675-683
PavĂ­a-Ruz, Norma; Barrera-Fuentes, Gloria Abigail; Villanueva-Jorge, Salha et al. (2018) Dengue seroprevalence in a cohort of schoolchildren and their siblings in Yucatan, Mexico (2015-2016). PLoS Negl Trop Dis 12:e0006748
Hladish, Thomas J; Pearson, Carl A B; Patricia Rojas, Diana et al. (2018) Forecasting the effectiveness of indoor residual spraying for reducing dengue burden. PLoS Negl Trop Dis 12:e0006570
Rojas, Diana Patricia; Barrera-Fuentes, Gloria Abigail; Pavia-Ruz, Norma et al. (2018) Epidemiology of dengue and other arboviruses in a cohort of school children and their families in Yucatan, Mexico: Baseline and first year follow-up. PLoS Negl Trop Dis 12:e0006847
Feldstein, Leora R; Rowhani-Rahbar, Ali; Staples, J Erin et al. (2018) An Assessment of Household and Individual-Level Mosquito Prevention Methods during the Chikungunya Virus Outbreak in the United States Virgin Islands, 2014-2015. Am J Trop Med Hyg 98:845-848
Brouwer, Andrew F; Eisenberg, Joseph N S; Pomeroy, Connor D et al. (2018) Epidemiology of the silent polio outbreak in Rahat, Israel, based on modeling of environmental surveillance data. Proc Natl Acad Sci U S A 115:E10625-E10633
Ma, Mai-Juan; Zhao, Teng; Chen, Shan-Hui et al. (2018) Avian Influenza A Virus Infection among Workers at Live Poultry Markets, China, 2013-2016. Emerg Infect Dis 24:1246-1256
Faulkner, James R; Minin, Vladimir N (2018) Locally Adaptive Smoothing with Markov Random Fields and Shrinkage Priors. Bayesian Anal 13:225-252
Ma, Mai-Juan; Liu, Cheng; Wu, Meng-Na et al. (2018) Influenza A(H7N9) Virus Antibody Responses in Survivors 1 Year after Infection, China, 2017. Emerg Infect Dis 24:663-672
Lee, Juhye M; Huddleston, John; Doud, Michael B et al. (2018) Deep mutational scanning of hemagglutinin helps predict evolutionary fates of human H3N2 influenza variants. Proc Natl Acad Sci U S A 115:E8276-E8285

Showing the most recent 10 out of 134 publications