Flow cytometry is used throughout basic and clinical research efforts. The complexity and magnitude of the data generated, however, can be a barrier to data sharing, annotation, and bioinformatics analysis. Currently, this barrier limits the ability of researchers to make cytometry data available to the public and to fulfill NIH mandates for data distribution. In this contract, we will expand the capabilities of Cytobank, a web-based flow cytometry platform, and enable researchers to 1) create web-accessible ?reports? of their experiments that links published figures with raw data, 2) annotate experiments with rich ontologies that place their work into searchable contexts, and 3) explore their data using advanced third party analysis algorithms written in statistical packages such as R. Achieving these goals will meet a critical need by developing and implementing a data sharing plan for researchers studying blood and related fields (immunology, leukemia &lymphoma, autoimmunity, stem cells), which routinely rely on flow cytometry.

Project Start
2011-09-23
Project End
2012-03-22
Budget Start
Budget End
Support Year
Fiscal Year
2011
Total Cost
$153,813
Indirect Cost
Name
Cytobank, Inc.
Department
Type
DUNS #
828762513
City
Mountain View
State
CA
Country
United States
Zip Code
94043