Core Unit C: Molecular Analysis Core A. Overview of Research Core Unit The Molecular Analysis Core will provide critical support to all three Component Projects (CPs). It will allow the CPs to (1) carry out sequence-based screening (TILLing) to find mutants in particular genes using reverse genetics;(2) analyze gene expression by wholemount in situ hybridization;and (3) genotype adult mutant carriers and individual mutant embryos The facility, located in the Radiobiology building immediately adjacent to the centralized zebrafish facility, (see Figure 1, above) will house PCR machines, gel apparatuses, and an in situ hybridization machine. It will have access to the University's Robotics and Gene Expression Core Facility, located in an adjacent building, the Eccles Institute of Human Genetics (1 minute walk). The facility director, Brent Bisgrove, Ph.D, has extensive experience in zebrafish developmental genetics and analysis of gene expression. A full-time postdoctoral fellow working in years 1-3 will optimize procedures for TILLing and supervise the TILLing project. A full-time laboratory technician will process samples for the mutation-screening and genotyping objectives and will maintain the in situ hybridization machine.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Research Program Projects (P01)
Project #
5P01HD048886-03
Application #
7782684
Study Section
Pediatrics Subcommittee (CHHD)
Project Start
Project End
Budget Start
2009-03-01
Budget End
2010-02-28
Support Year
3
Fiscal Year
2009
Total Cost
$139,898
Indirect Cost
Name
University of Utah
Department
Type
DUNS #
009095365
City
Salt Lake City
State
UT
Country
United States
Zip Code
84112
Morrow, Zachary T; Maxwell, Adrienne M; Hoshijima, Kazuyuki et al. (2017) tbx6l and tbx16 are redundantly required for posterior paraxial mesoderm formation during zebrafish embryogenesis. Dev Dyn 246:759-769
Yabe, Taijiro; Hoshijima, Kazuyuki; Yamamoto, Takashi et al. (2016) Quadruple zebrafish mutant reveals different roles of Mesp genes in somite segmentation between mouse and zebrafish. Development 143:2842-52
Ota, Satoshi; Hisano, Yu; Muraki, Michiko et al. (2013) Efficient identification of TALEN-mediated genome modifications using heteroduplex mobility assays. Genes Cells 18:450-8
Kruse-Bend, Renee; Rosenthal, Jude; Quist, Tyler S et al. (2012) Extraocular ectoderm triggers dorsal retinal fate during optic vesicle evagination in zebrafish. Dev Biol 371:57-65
Xing, Lingyan; Hoshijima, Kazuyuki; Grunwald, David J et al. (2012) Zebrafish foxP2 zinc finger nuclease mutant has normal axon pathfinding. PLoS One 7:e43968
Dahlem, Timothy J; Hoshijima, Kazuyuki; Jurynec, Michael J et al. (2012) Simple methods for generating and detecting locus-specific mutations induced with TALENs in the zebrafish genome. PLoS Genet 8:e1002861
Bisgrove, Brent W; Makova, Svetlana; Yost, H Joseph et al. (2012) RFX2 is essential in the ciliated organ of asymmetry and an RFX2 transgene identifies a population of ciliated cells sufficient for fluid flow. Dev Biol 363:166-78
Wang, Xu; Kopinke, Daniel; Lin, Junji et al. (2012) Wnt signaling regulates postembryonic hypothalamic progenitor differentiation. Dev Cell 23:624-36
Demarest, Bradley L; Horsley, Wyatt H; Locke, Erin E et al. (2011) Trans-centromere effects on meiotic recombination in the zebrafish. Genetics 187:333-6
Wythe, Joshua D; Jurynec, Michael J; Urness, Lisa D et al. (2011) Hadp1, a newly identified pleckstrin homology domain protein, is required for cardiac contractility in zebrafish. Dis Model Mech 4:607-21

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