COMPUTATIONAL/INFORMATICS SHARED RESOURCE: POPULATION STUDIES FACILITY (PSF) PROJECT SUMMARY/ABSTRACT PSF was rated Outstanding at the last review. Computer-based tools are vital to many research studies? success, particularly those that collect large amounts of data or involve complex data collection protocols. The PSF facilitates FCCC research by providing critical informatics infrastructure and customized, project-specific information systems for Cancer Center members. PSF, with the direction of Eric Ross, PhD and a staff of 5.5 FTEs provides members with a stable, cost-effective team of information systems professionals with state-of- the-art software design and engineering skills appropriate to cancer research. PSF functions include development of: databases for the storage and manipulation of large quantities of questionnaire, clinical, molecular and specimen data; electronic data capture interfaces; report generation software; consistency and quality control systems; web-enabled multimedia applications; and systems that provide integration and controlled exchange of data from diverse sources. PSF is a critical component of the research infrastructure to which all Cancer Center members have ready access. PSF has developed systems that maintain data on over 210,000 subjects. More than 90,000 were enrolled in FCCC studies within the US; the remainder were in international cohort studies. PSF staff are proficient with software tools for managing complex databases and expert with methods employed by collaborating investigators. From 2011-2014, the PSF provided 32,596 consulting hours in support of 38 Cancer Center members in four Research Programs. It provided 7,125 consulting hours to 24 Cancer Center members in 2014. 6,380 of the consulting hours (90%) were in support of peer-review funded Cancer Center members. PSF provided direct informatics support to seven other FCCC CCSG-supported faciltiies during the current cycle. The PSF also collaborated with the Clinical Trials Office on deployment, customization and integration of new core informatics tools to support clinical research and associated regulatory functions. PSF expanded the Fox Chase Data Warehouse (FCDW) during the current cycle. It now integrates data from 41 research and clinical systems derived from 228,000 patients and study participants. The FCDW stimulates new collaborations and opportunities for translational and correlative research. From 2011 to June 2015, the PSF contributed to 117 manuscripts, of which PSF personnel are co-authors on 27. PSF has access to an extensive, up-to-date computing environment that includes open source and commercial software engineering tools. The PSF is advised by a dedicated Facility Advisory Committee (FAC) that meets annually. Recommendations from the FAC are directed to a governing Facility Parent Oversight Committee (FPOC) that serves to ensure that the PSF continues to have the necessary resources to provide the highest quality informatics services for Cancer Center members. Demand for services is expected to increase in the next CCSG cycle due to plans to recruit in all 5 Research Programs and new demand from Cancer Center members at TU.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
3P30CA006927-54S4
Application #
10113009
Study Section
Subcommittee I - Transistion to Independence (NCI)
Program Officer
Shafik, Hasnaa
Project Start
Project End
Budget Start
2019-08-01
Budget End
2020-07-31
Support Year
54
Fiscal Year
2020
Total Cost
Indirect Cost
Name
Research Institute of Fox Chase Cancer Center
Department
Type
DUNS #
064367329
City
Philadelphia
State
PA
Country
United States
Zip Code
19111
Chow, H Y; Dong, B; Valencia, C A et al. (2018) Group I Paks are essential for epithelial- mesenchymal transition in an Apc-driven model of colorectal cancer. Nat Commun 9:3473
Egleston, Brian L; Pedraza, Omar; Wong, Yu-Ning et al. (2018) Temporal trends and characteristics of clinical trials for which only one racial or ethnic group is eligible. Contemp Clin Trials Commun 9:135-142
Golemis, Erica A; Scheet, Paul; Beck, Tim N et al. (2018) Molecular mechanisms of the preventable causes of cancer in the United States. Genes Dev 32:868-902
Reese, Jennifer Barsky; Sorice, Kristen; Lepore, Stephen J et al. (2018) Patient-clinician communication about sexual health in breast cancer: A mixed-methods analysis of clinic dialogue. Patient Educ Couns :
Wagner, Jessica; Kline, C Leah; Zhou, Lanlan et al. (2018) Dose intensification of TRAIL-inducing ONC201 inhibits metastasis and promotes intratumoral NK cell recruitment. J Clin Invest 128:2325-2338
Araiza-Olivera, D; Feng, Y; Semenova, G et al. (2018) Suppression of RAC1-driven malignant melanoma by group A PAK inhibitors. Oncogene 37:944-952
Fareed, Muhammad M; Eldib, Ahmed; Weiss, Stephanie E et al. (2018) A treatment planning comparison between a novel rotating gamma system and robotic linear accelerator based intracranial stereotactic radiosurgery/radiotherapy. Phys Med Biol 63:035029
Bleicher, Richard J (2018) Timing and Delays in Breast Cancer Evaluation and Treatment. Ann Surg Oncol 25:2829-2838
Mehrazin, Reza; Dulaimi, Essel; Uzzo, Robert G et al. (2018) The correlation between gain of chromosome 8q and survival in patients with clear and papillary renal cell carcinoma. Ther Adv Urol 10:3-10
Bai, Tian; Chanda, Ashis Kumar; Egleston, Brian L et al. (2018) EHR phenotyping via jointly embedding medical concepts and words into a unified vector space. BMC Med Inform Decis Mak 18:123

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