BIOSPECIMENS ACCESSIONING AND PROCESSING SHARED RESOURCE PROJECT SUMMARY The Mayo Clinic research enterprise includes several well-established, NIH-supported research programs and centers, including the NCI-designated comprehensive Mayo Clinic Cancer Center (MCCC) and the Mayo Clinic Center for Individualized Medicine (CIM) whose goal is to move advances in genomics, epigenomics, transcriptomics, and metabolomics into the clinic as rapidly as possible. The Biorepository Program, 1 of the 7 infrastructure programs overseen by CIM, is enterprise-wide, with all activities represented at Mayo Clinic Rochester, Mayo Clinic Florida, and Mayo Clinic Arizona. The mission of the Biorepository Program is to provide world-class biorepositories and state-of-the-art biospecimen processing and storage with a focus on quality and service. The Biorepository Program's Biospecimens Accessioning and Processing (BAP) laboratory provides pre-analytical processing and storage of any type of biospecimen to support the eventual translation of scientific discoveries into clinical practice. In addition to its role as an MCCC Shared Resource, BAP provides extensive support to a number of cancer-related Specialized Programs of Research Excellence (SPOREs); clinical trial groups, such Alliance and Academic and Community Cancer Research United (ACCRU); multisite/consortium groups; and the American Cancer Society. BAP's electronic biospecimen accessioning and tracking, combined with a broad range of specimen processing services, have created a very powerful, synergistic resource that is invaluable for supporting the Basic Science, Clinical and Translational Research and Population Sciences Programs of the MCCC. BAP is also a great biospecimen resource for MCCC members. There are 2 large cohorts that the BAP lab stores in the biorepository: 1) The Mayo Clinic Biobank is an institutional resource that contains biological specimens from 50,000 volunteers from our clinics who also provided self-reported risk-factor data, access to the clinical data in their medical records, and consent to participate in unspecified research studies. Today, over 1.25 million aliquots have been prepared and stored in a robotic freezer for future use. Data and specimens have been requested by close to 90 Mayo Clinic investigators from all 3 sites for more than 200 approved projects. On average, two-thirds of the PIs requesting specimens are MCCC members; 2) The All of Us Research Program Biobank is an NIH Precision Medicine Initiative; in 2016, BAP was tapped to be the central biobank for processing and storing biospecimens from 1 million participants. The 34 million specimens, together with their corresponding data, will be another good resource for the research of MCCC members. This award, together with institutional support, has allowed BAP to expand in capacity, capability, automation, and space, which will be a great benefit to MCCC members.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
2P30CA015083-45
Application #
9703007
Study Section
Subcommittee I - Transistion to Independence (NCI)
Project Start
Project End
Budget Start
2019-03-01
Budget End
2020-02-29
Support Year
45
Fiscal Year
2019
Total Cost
Indirect Cost
Name
Mayo Clinic, Rochester
Department
Type
DUNS #
006471700
City
Rochester
State
MN
Country
United States
Zip Code
55905
Nowsheen, Somaira; Aziz, Khaled; Aziz, Asef et al. (2018) L3MBTL2 orchestrates ubiquitin signalling by dictating the sequential recruitment of RNF8 and RNF168 after DNA damage. Nat Cell Biol 20:455-464
Razidlo, Gina L; Burton, Kevin M; McNiven, Mark A (2018) Interleukin-6 promotes pancreatic cancer cell migration by rapidly activating the small GTPase CDC42. J Biol Chem 293:11143-11153
Wu, Dongyan; Yang, Haitao; Winham, Stacey J et al. (2018) Mediation analysis of alcohol consumption, DNA methylation, and epithelial ovarian cancer. J Hum Genet 63:339-348
Leon-Ferre, Roberto A; Polley, Mei-Yin; Liu, Heshan et al. (2018) Impact of histopathology, tumor-infiltrating lymphocytes, and adjuvant chemotherapy on prognosis of triple-negative breast cancer. Breast Cancer Res Treat 167:89-99
Jahanseir, Khadijeh; Xing, Deyin; Greipp, Patricia T et al. (2018) PDGFB Rearrangements in Dermatofibrosarcoma Protuberans of the Vulva: A Study of 11 Cases Including Myxoid and Fibrosarcomatous Variants. Int J Gynecol Pathol 37:537-546
Painter, Jodie N; O'Mara, Tracy A; Morris, Andrew P et al. (2018) Genetic overlap between endometriosis and endometrial cancer: evidence from cross-disease genetic correlation and GWAS meta-analyses. Cancer Med 7:1978-1987
Yu, Jia; Qin, Bo; Moyer, Ann M et al. (2018) DNA methyltransferase expression in triple-negative breast cancer predicts sensitivity to decitabine. J Clin Invest 128:2376-2388
Sugihara, Takaaki; Werneburg, Nathan W; Hernandez, Matthew C et al. (2018) YAP Tyrosine Phosphorylation and Nuclear Localization in Cholangiocarcinoma Cells Are Regulated by LCK and Independent of LATS Activity. Mol Cancer Res 16:1556-1567
Natanzon, Yanina; Goode, Ellen L; Cunningham, Julie M (2018) Epigenetics in ovarian cancer. Semin Cancer Biol 51:160-169
Kleinstern, Geffen; Camp, Nicola J; Goldin, Lynn R et al. (2018) Association of polygenic risk score with the risk of chronic lymphocytic leukemia and monoclonal B-cell lymphocytosis. Blood 131:2541-2551

Showing the most recent 10 out of 1129 publications