Biostatistics and Computational Biology Program The Biostatistics and Computational Biology Program carries out quantitative and computational research in a variety of areas relevant to understanding issues related to cancer. Program interests span a range of activities, from the technical development of quantitative or experimental methodologies to activities that emphasize substantive research programs in epidemiology, to biological research programs that use experimental approaches alongside computational methods. Program strengths include the development of rigorous statistical and mathematical methods for personalized medicine and molecular diagnostics, understanding the molecular biology of the adaptive immune response, and the development of approaches that address high impact opportunities in cancer research - including methods for the analysis of complex association studies and longitudinal data, and experimental/ computational methods that characterize variations in quantity, sequence, and structure of the human genome, transcriptome, and proteome. The program members also have leadership activities that impact cancer research at a national level, including a number of U01s, a variety of statistical coordinating centers -- the Southwest Oncology Group (SWOG), the National Wilms Tumor Study, the Women's Health Initiative (WHI), the Statistical Centers for the HIV/AIDS Research & Prevention (SCHARP), and the Early Detection Research Network (EDRN) - and the leadership of multiple widely adopted computing platforms. The goals of the program are (i) to develop rigorous statistical and mathematical methods relevant to predictive and personalized medicine; (ii) to develop and use experimental, technological, and companion computational or mathematical methods to gain understanding of the natural history of cancer; and (iii) to promote development, dissemination and use of statistical and computational methods in cancer research. The Biostatistics and Computational Biology Program has 42 members, 93% of whom have external funding or are new faculty members, across two institutions, three schools and seven departments. Members published a total of 813 papers in the previous grant period. Program members are highly collaborative and routinely work with epidemiological, clinical, and laboratory-based researchers in other programs to support the translation of our expertise across the CCSG - 54% of our manuscripts were inter-programmatic, 10% were intra- programmatic, and 19% inter-institutional . Our members have been successful in obtaining funding to support their research programs. Peer reviewed funding (direct) is $10.9M of which $5.4M is from NCI, and includes many single-investigator R01s, several U01s, a longstanding P01, a variety of other peer reviewed grants or fellowships, and large-scale collaborative working groups.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
5P30CA015704-44
Application #
9617732
Study Section
Subcommittee I - Transistion to Independence (NCI)
Project Start
Project End
Budget Start
2019-01-01
Budget End
2019-12-31
Support Year
44
Fiscal Year
2019
Total Cost
Indirect Cost
Name
Fred Hutchinson Cancer Research Center
Department
Type
DUNS #
078200995
City
Seattle
State
WA
Country
United States
Zip Code
98109
Syrjala, Karen L; Yi, Jean C; Artherholt, Samantha B et al. (2018) An online randomized controlled trial, with or without problem-solving treatment, for long-term cancer survivors after hematopoietic cell transplantation. J Cancer Surviv 12:560-570
Hempstead, Bridgette; Green, Cynthia; Briant, Katherine J et al. (2018) Community Empowerment Partners (CEPs): A Breast Health Education Program for African-American Women. J Community Health 43:833-841
OhAinle, Molly; Helms, Louisa; Vermeire, Jolien et al. (2018) A virus-packageable CRISPR screen identifies host factors mediating interferon inhibition of HIV. Elife 7:
Liu, Yanyan; Xiong, Sican; Sun, Wei et al. (2018) Joint Analysis of Strain and Parent-of-Origin Effects for Recombinant Inbred Intercrosses Generated from Multiparent Populations with the Collaborative Cross as an Example. G3 (Bethesda) 8:599-605
Liu, Yang; He, Qianchan; Sun, Wei (2018) Association analysis using somatic mutations. PLoS Genet 14:e1007746
Glaser, Adam K; Chen, Ye; Yin, Chengbo et al. (2018) Multidirectional digital scanned light-sheet microscopy enables uniform fluorescence excitation and contrast-enhanced imaging. Sci Rep 8:13878
Du, Jing; Flynn, Ryan; Paz, Katelyn et al. (2018) Murine chronic graft-versus-host disease proteome profiling discovers CCL15 as a novel biomarker in patients. Blood 131:1743-1754
Mora-Pinzon, Maria C; Trentham-Dietz, Amy; Gangnon, Ronald E et al. (2018) Urinary Magnesium and Other Elements in Relation to Mammographic Breast Density, a Measure of Breast Cancer Risk. Nutr Cancer 70:441-446
Shirts, Brian H; Konnick, Eric Q; Upham, Sarah et al. (2018) Using Somatic Mutations from Tumors to Classify Variants in Mismatch Repair Genes. Am J Hum Genet 103:19-29
Kuzma, Jessica N; Hagman, Derek K; Cromer, Gail et al. (2018) Intra-individual variation in markers of intestinal permeability and adipose tissue inflammation in healthy normal weight to obese adults. Cancer Epidemiol Biomarkers Prev :

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