Biostatistics Shared Resource (BSR) The BSR provides comprehensive biostatistics support of cancer research for MCC investigators. The resource was established in 1995 and Dr. Messer (CP), a nationally recognized biostatistician, has been the BSR Director since the prior renewal in 2006. Additional leadership of the BSR is provided by Dr. Natarajan (CP), a very experienced mathematician and biostatistician, and Dr. Baru, a world-renowned leader in informatics infrastructure at the SD Supercomputer Center (SDSC). The BSR also provides database and informatics services for cancer studies, collaborating with SDSC and Clinical and Translational Research Institute (CTRI). The BSR comprises 10.9 FTE of cancer-funded effort, including 5 faculty in the Division of Biostatistics in Family and Preventive Medicine, a senior leader at the SD Supercomputer Center, a faculty member with appointments in both the Department of Computer Science and at SDSU's Graduate School of Public Health, and 9 biostatistics, bioinformatics and informatics staff at the PhD or Master's level. Three faculty and all staff have offices on the third floor of the MCC building, creating a Biostatistics suite with well-defined signage. Key biostatistics objectives of the BSR include support of new grant applications, and support for design, monitoring, analysis, interpretation of results and manuscript preparation for cancer-related studies. Key informatics objectives include database design, development and support;integration of diverse software and web applications;and electronic data capture for clinical trials and patient registries, including pullback from EPIC medical record. BSR services are divided between short-term consulting, supported by the CCSG without charge to MCC investigators, and longer-term collaboration that is funded from collaborative grants. Service requests are accepted in person, by phone, email, or web request, and are tracked using a web-based system. During the period 2007-2012, the BSR supported 130 different MCC investigators resulting in 133 co-authored cancer-related, peer-reviewed papers, and 255 grant submissions. Furthermore, the BSR assisted in developing 80 therapeutic protocols. In 2012, 51 MCC members representing all six programs used BSR services accounting for 99% of shared resource utilization, and the BSR received 18% of its funding from the CCSG. This is a continuing shared resource.

Public Health Relevance

The Biostatistics Shared Resource (BSR) provides MCC investigators with statistical expertise to assist in the design and analysis of cancer-related studies. BSR biostatisticians ensure that clinical trials and other studies have well defined end-points and rigorous analysis plans, and are designed for maximal efficiency To ensure a high scientific standard in data analysis and interpretation of study results.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
2P30CA023100-28
Application #
8934959
Study Section
Subcommittee G - Education (NCI)
Program Officer
Shafik, Hasnaa
Project Start
2014-07-21
Project End
2019-04-30
Budget Start
2014-07-21
Budget End
2015-04-30
Support Year
28
Fiscal Year
2014
Total Cost
$363,567
Indirect Cost
$126,672
Name
University of California San Diego
Department
Type
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Singh, Siddharth; Loomba, Rohit (2018) Role of two-dimensional shear wave elastography in the assessment of chronic liver diseases. Hepatology 67:13-15
Hartman, Sheri J; Nelson, Sandahl H; Myers, Emily et al. (2018) Randomized controlled trial of increasing physical activity on objectively measured and self-reported cognitive functioning among breast cancer survivors: The memory & motion study. Cancer 124:192-202
Hoffmann, Hanne M; Gong, Ping; Tamrazian, Anika et al. (2018) Transcriptional interaction between cFOS and the homeodomain-binding transcription factor VAX1 on the GnRH promoter controls Gnrh1 expression levels in a GnRH neuron maturation specific manner. Mol Cell Endocrinol 461:143-154
Liu, Xuxiang; Cao, Minghui; Palomares, Melanie et al. (2018) Metastatic breast cancer cells overexpress and secrete miR-218 to regulate type I collagen deposition by osteoblasts. Breast Cancer Res 20:127
Huang, Justin K; Carlin, Daniel E; Yu, Michael Ku et al. (2018) Systematic Evaluation of Molecular Networks for Discovery of Disease Genes. Cell Syst 6:484-495.e5
Kalyanaraman, Hema; Schwaerzer, Gerburg; Ramdani, Ghania et al. (2018) Protein Kinase G Activation Reverses Oxidative Stress and Restores Osteoblast Function and Bone Formation in Male Mice With Type 1 Diabetes. Diabetes 67:607-623
Hartman, Sheri J; Marinac, Catherine R; Cadmus-Bertram, Lisa et al. (2018) Sedentary Behaviors and Biomarkers Among Breast Cancer Survivors. J Phys Act Health 15:1-6
Wu, Yan; Tamayo, Pablo; Zhang, Kun (2018) Visualizing and Interpreting Single-Cell Gene Expression Datasets with Similarity Weighted Nonnegative Embedding. Cell Syst 7:656-666.e4
Dow, Michelle; Pyke, Rachel M; Tsui, Brian Y et al. (2018) Integrative genomic analysis of mouse and human hepatocellular carcinoma. Proc Natl Acad Sci U S A 115:E9879-E9888
Que, Xuchu; Hung, Ming-Yow; Yeang, Calvin et al. (2018) Oxidized phospholipids are proinflammatory and proatherogenic in hypercholesterolaemic mice. Nature 558:301-306

Showing the most recent 10 out of 862 publications