5.4 Abstract - FLOW CYTOMETRY (Core Group A) The Flow Cytometry Shared Resource (Core Group A) offers Cancer Center users multi-parametric evaluation and high-speed enrichment of phenotypically distinct cell populations using flow cytometry. For analytical flow cytometry, investigators have a choice of full-service analysis, or receiving training for independent use of four analytical flow cytometers (BD LSRFortessa, BD FACSCanto, BD FACSCalibur, Millipore Muse). Investigator training and consulting is also provided on analytical software including FACSDiVa, CellQuest, FlowJo, and ModFitLT. For high-speed cell sorting, the Core provides experimental planning and full-service cell sorting by two expert operators, utilizing two BD FACSAria sorters in biosafety cabinets. The Resource is staffed by two full-time cytometrists with a combined 18 years of experience in NCI- designated Cancer Center flow cytometry cores. Resource staff provide investigators with extensive flow cytometry guidance, from experimental set-up, selection of reagents, setting gating or sorting parameters, data interpretation, and development of new methods. The Core is widely used and, as in the past funding period, services were provided for over 40 Cancer Center members, representing all three Programs, and Flow Cytometry supported key experiments described in at least 91 cancer-relevant publications from Cancer Center members. There have been quite dramatic upgrades to the Core in the past funding period. A half-time staff member assisting the Director was replaced by an accomplished full-time cytometrist, and the Resource implemented iLab web-based software to streamline Core scheduling, project management, and billing. Technology upgrades to the core include the addition of two BD FACSAria sorters (11-color and 16-color) housed in custom biosafety cabinets, a 14-color BD LSRFortessa analyzer with a 96 well plate-loader, and a Millipore Muse Cell Analyzer. An Amnis ImageStreamX Mark II imaging cytometer was purchased and will be installed in May 2014. This instrument with three lasers combines flow cytometry with high resolution microscopy to enable spatial and morphological analysis of cells in flow, including rare cells. Plans for future development of the Resource include evaluation of hardware for time-of-flight mass cytometry, microfluidic sorting of circulating tumor cells, and automated magnetic separation.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
5P30CA030199-37
Application #
9478056
Study Section
Subcommittee I - Transistion to Independence (NCI)
Project Start
Project End
Budget Start
2018-05-01
Budget End
2019-04-30
Support Year
37
Fiscal Year
2018
Total Cost
Indirect Cost
Name
Sanford Burnham Prebys Medical Discovery Institute
Department
Type
DUNS #
020520466
City
La Jolla
State
CA
Country
United States
Zip Code
92037
Pathria, Gaurav; Scott, David A; Feng, Yongmei et al. (2018) Targeting the Warburg effect via LDHA inhibition engages ATF4 signaling for cancer cell survival. EMBO J 37:
Sun, Younguk; Chen, Bo-Rui; Deshpande, Aniruddha (2018) Epigenetic Regulators in the Development, Maintenance, and Therapeutic Targeting of Acute Myeloid Leukemia. Front Oncol 8:41
Ekanayake, Vindana; Nisan, Danielle; Ryzhov, Pavel et al. (2018) Lipoprotein Particle Formation by Proapoptotic tBid. Biophys J 115:533-542
Diez-Cuñado, Marta; Wei, Ke; Bushway, Paul J et al. (2018) miRNAs that Induce Human Cardiomyocyte Proliferation Converge on the Hippo Pathway. Cell Rep 23:2168-2174
Wang, Yang; Li, Yue; Yue, Minghui et al. (2018) N6-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications. Nat Neurosci 21:195-206
Lundquist, Mark R; Goncalves, Marcus D; Loughran, Ryan M et al. (2018) Phosphatidylinositol-5-Phosphate 4-Kinases Regulate Cellular Lipid Metabolism By Facilitating Autophagy. Mol Cell 70:531-544.e9
Ramirez, Monica L Gonzalez; Poreba, Marcin; Snipas, Scott J et al. (2018) Extensive peptide and natural protein substrate screens reveal that mouse caspase-11 has much narrower substrate specificity than caspase-1. J Biol Chem 293:7058-7067
Wei, Yang; Toth, Julia I; Blanco, Gabrielle A et al. (2018) Adapted ATPase domain communication overcomes the cytotoxicity of p97 inhibitors. J Biol Chem 293:20169-20180
Tinoco, Roberto; Carrette, Florent; Henriquez, Monique L et al. (2018) Fucosyltransferase Induction during Influenza Virus Infection Is Required for the Generation of Functional Memory CD4+ T Cells. J Immunol 200:2690-2702
Wonder, Emily; Simón-Gracia, Lorena; Scodeller, Pablo et al. (2018) Competition of charge-mediated and specific binding by peptide-tagged cationic liposome-DNA nanoparticles in vitro and in vivo. Biomaterials 166:52-63

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