Phenotyping Sciences provides Cancer Center faculty with diverse tools, techniques and expertise for the conduct of gene expression, molecular biology, flow cytometry, and protein chemistry methods. Created as a result of the reorganization of Scientific Services in 2004, this department comprises the former Microchemistry and Flow Cytometry Services. Microchemistry has been supported by the Cancer Center Support Grant since the Service was developed 17 years ago, while Flow Cytometry has been supported for the full 23-year term of the grant. The Phenotyping Sciences Service provides researchers with access to state-of-the-art gene expression technologies, nucleic acid isolation and quality assessment, gene targeting and transgenic construct design, protein chemistry services, advanced flow cytometric technology and a monoclonal antibody resource. Access to these services is essential to Cancer Center staff. Overall use of the Phenotyping Sciences Service has increased by 55% over the past five years. The Phenotyping Sciences Project Leader, Senior Staff Scientist Dr. Derry Roopenian, oversees this fee-for-service operation. Three gene expression technologists, two flow cytometrists, three molecular biologists, a protein chemist, and senior manager staff the facility which occupies 1,851 ft2 of laboratory space in the Research Laboratory Unit 4 building. The Service is dynamic, continuously increasing and improving its array of services to meet the needs of the Cancer Center members. Since the last renewal, significant advancements in technology have provided for the expansion and improvement of multi-color flow cytometry and sorting, gene expression microarray analysis, and multiplexed protein assay services. Phenotyping Sciences is completely integrated with the other services at the Center, including Computational Sciences, Reproductive Sciences-Cell Biology and Microinjection, and SNP Genotyping to provide a comprehensive set of support services for cancer research. Dr. Roopenian communicates with the Cancer Center users, Service staff and Center Administration to ensure that research needs are met in the most efficient, cost-effective and technically current manner.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
5P30CA034196-27
Application #
8113199
Study Section
Subcommittee G - Education (NCI)
Project Start
Project End
Budget Start
2010-07-01
Budget End
2011-06-30
Support Year
27
Fiscal Year
2010
Total Cost
$523,608
Indirect Cost
Name
Jackson Laboratory
Department
Type
DUNS #
042140483
City
Bar Harbor
State
ME
Country
United States
Zip Code
04609
Gong, Liang; Wong, Chee-Hong; Cheng, Wei-Chung et al. (2018) Picky comprehensively detects high-resolution structural variants in nanopore long reads. Nat Methods 15:455-460
Noorbakhsh, Javad; Kim, Hyunsoo; Namburi, Sandeep et al. (2018) Distribution-based measures of tumor heterogeneity are sensitive to mutation calling and lack strong clinical predictive power. Sci Rep 8:11445
Gatti, D M; Weber, S N; Goodwin, N C et al. (2018) Genetic background influences susceptibility to chemotherapy-induced hematotoxicity. Pharmacogenomics J 18:319-330
deCarvalho, Ana C; Kim, Hoon; Poisson, Laila M et al. (2018) Discordant inheritance of chromosomal and extrachromosomal DNA elements contributes to dynamic disease evolution in glioblastoma. Nat Genet 50:708-717
Leidy-Davis, Tiffany; Cheng, Kai; Goodwin, Leslie O et al. (2018) Viable Mice with Extensive Gene Humanization (25-kbp) Created Using Embryonic Stem Cell/Blastocyst and CRISPR/Zygote Injection Approaches. Sci Rep 8:15028
Mistri, Tapan Kumar; Arindrarto, Wibowo; Ng, Wei Ping et al. (2018) Dynamic changes in Sox2 spatio-temporal expression promote the second cell fate decision through Fgf4/Fgfr2 signaling in preimplantation mouse embryos. Biochem J 475:1075-1089
Presa, Maximiliano; Racine, Jeremy J; Dwyer, Jennifer R et al. (2018) A Hypermorphic Nfkbid Allele Contributes to Impaired Thymic Deletion of Autoreactive Diabetogenic CD8+ T Cells in NOD Mice. J Immunol 201:1907-1917
Raghupathy, Narayanan; Choi, Kwangbom; Vincent, Matthew J et al. (2018) Hierarchical analysis of RNA-seq reads improves the accuracy of allele-specific expression. Bioinformatics 34:2177-2184
Pullagura, Sri Ramulu N; Buaas, Bill; Gray, Nichelle et al. (2018) Functional Redundancy of DICER Cofactors TARBP2 and PRKRA During Murine Embryogenesis Does Not Involve miRNA Biogenesis. Genetics 208:1513-1522
Cho, Sung-Yup; Sung, Chang Ohk; Chae, Jeesoo et al. (2018) Alterations in the Rho pathway contribute to Epstein-Barr virus-induced lymphomagenesis in immunosuppressed environments. Blood 131:1931-1941

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