The mission of the Cancer Genomics Shared Resource (CGSR) is to provide Masonic Cancer Center (MCC) investigators with broad, deep, and affordable access to state-of-the-art genomic services. In addition to maintaining a world-class suite of genomic instrumentation, the Directors and staff of the CGSR help advance investigators' science through consultation about technology choices and workflows, including upstream preparative and downstream bioinformatics and data interpretation steps. The skilled staff can perform all of the technical components of the work or can collaborate with the investigator's own laboratory staff, providing training and access to equipment they would otherwise not be able to utilize. CGSR assays range from conventional cytogenetics to the most current single-cell and next-generation sequencing technologies. These enable MCC researchers to address critical questions relevant to the etiology, behavior, and treatment of hematologic and solid tumors. There is no other resource at the University of Minnesota that provides these services to researchers. The structure and name of this Shared Resource was changed during the last funding cycle. Specifically, the Cytogenomics Shared Resource merged with the services of the University of Minnesota Genomics Center (UMGC) to become the CGSR. The CGSR, co-directed by Drs. Betsy Hirsch and Kenneth Beckman, with expertise in cytogenomics and molecular genomic technologies, respectively, will simplify navigation by MCC members through the complex spectrum of genomic assays offered at the UMN. The CGSR will ensure focused attention on the specific scientific needs of MCC investigators while benefitting from the synergies resulting from integration with the UMGC which serves the entire University community. In the new CGSR, there will be an additional PhD-level full-time equivalent (FTE) Research Scientist devoted specifically to customized work for MCC members, facilitating the development of novel assays, generation of pilot data, and the advancement of cancer research projects.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
2P30CA077598-21
Application #
9631653
Study Section
Subcommittee I - Transistion to Independence (NCI)
Project Start
Project End
Budget Start
2019-02-01
Budget End
2020-01-31
Support Year
21
Fiscal Year
2019
Total Cost
Indirect Cost
Name
University of Minnesota Twin Cities
Department
Type
DUNS #
555917996
City
Minneapolis
State
MN
Country
United States
Zip Code
55455
Xu, Bin; Magli, Alessandro; Anugrah, Yoska et al. (2018) Nanotopography-responsive myotube alignment and orientation as a sensitive phenotypic biomarker for Duchenne Muscular Dystrophy. Biomaterials 183:54-66
Nikodemova, Maria; Yee, Jeremiah; Carney, Patrick R et al. (2018) Transcriptional differences between smokers and non-smokers and variance by obesity as a risk factor for human sensitivity to environmental exposures. Environ Int 113:249-258
Rashidi, Armin; Shanley, Ryan; Anasetti, Claudio et al. (2018) Analysis of BMT CTN-0201 and -0901 samples did not reproduce the reported association between recipient REG3A rs7588571 and chronic GVHD. Bone Marrow Transplant :
Lin, Lifeng; Chu, Haitao (2018) Bayesian multivariate meta-analysis of multiple factors. Res Synth Methods 9:261-272
Mondragon-Gonzalez, Ricardo; Perlingeiro, Rita C R (2018) Recapitulating muscle disease phenotypes with myotonic dystrophy 1 induced pluripotent stem cells: a tool for disease modeling and drug discovery. Dis Model Mech 11:
Kim, J-H; Frantz, A M; Sarver, A L et al. (2018) Modulation of fatty acid metabolism and immune suppression are features of in vitro tumour sphere formation in ontogenetically distinct dog cancers. Vet Comp Oncol 16:E176-E184
Jin, Jin; Zhang, Lin; Leng, Ethan et al. (2018) Detection of prostate cancer with multiparametric MRI utilizing the anatomic structure of the prostate. Stat Med 37:3214-3229
Pierpont, Elizabeth I; Hudock, Rebekah L; Foy, Allison M et al. (2018) Social skills in children with RASopathies: a comparison of Noonan syndrome and neurofibromatosis type 1. J Neurodev Disord 10:21
Carlson, Erik S; Upadhyaya, Pramod; Villalta, Peter W et al. (2018) Analysis and Identification of 2'-Deoxyadenosine-Derived Adducts in Lung and Liver DNA of F-344 Rats Treated with the Tobacco-Specific Carcinogen 4-(Methylnitrosamino)-1-(3-pyridyl)-1-butanone and Enantiomers of its Metabolite 4-(Methylnitrosamino)-1-(3-p Chem Res Toxicol 31:358-370
Lin, Lifeng; Chu, Haitao; Murad, Mohammad Hassan et al. (2018) Empirical Comparison of Publication Bias Tests in Meta-Analysis. J Gen Intern Med 33:1260-1267

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