Biopolymer Shared ServiceThe Biopolymer Shared Service (SS) uses state-of-the-art instrumentation to support molecular biologybasedresearch through services that include DNA/RNA synthesis, DMA sequencing, genotyping, andpeptide synthesis. The facility provides these services to the entire University of Maryland campus. TheUniversity of Maryland Marlene and Stewart Greenebaum Cancer Center's (UMGCC's) membershipaccounts for about one fourth of the facility's use.The Biopolymer SS synthesizes oligonucleotides with a rapid 24-hour turnaround time. The facility alsoroutinely synthesizes specialty oligonucleotides, such as SiRNA, and dual-labeled fluorescence resonanceenergy transfer probes, molecular beacons, and antisense oligonucleotides in a rapid, cost-effectivemanner. The addition of a 96-capillary array DNA sequencer (ABI 3730XL) to the facility has greatlyenhanced this service, decreasing chargeback costs and turnaround time and increasing throughput. AnAffymetrix GeneChip System 3000 7G supports microarray-based expression and genome-wide associationstudies. The use of synthetic peptides in this research environment has expanded through the facility'sability to provide modified peptides, such as cyclic peptides, via multiple methodologies, labeled peptides,and complex multibranched polymers. The Biopolymer SS will incorporate an Illumina (formerly Solexa)Genome Analyzer in fall 2007, with significant support from UMGCC. This next-generation sequencer willenhance the capabilities to detect novel, cancer-associated mutations and provide a unique platform fordetermining changes in gene expression.Additionally, the Biopolymer SS embodies an intellectual reservoir for the development of innovativetechnology. The facility's partnership with investigators greatly enhances its research programs. The sharedservice has also developed novel peptide standards in conjunction with the National Institute of Standardsand Technology; these will serve as standard reference material for drug validation and instrumentcalibration. The facility has received competitive shared instrumentation grants, allowing it to provide highlyeffective support of cutting-edge research with state-of-the-art instrumentation. This effectiveness ismeasurable by the large number of publications that the facility has supported: more than 100 publicationsper year from members of UMGCC alone. Many of these publications focus on investigations funded by theNational Cancer Institute.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
1P30CA134274-01
Application #
7696605
Study Section
Subcommittee G - Education (NCI)
Project Start
2008-08-08
Project End
2011-07-31
Budget Start
2008-08-08
Budget End
2009-07-31
Support Year
1
Fiscal Year
2008
Total Cost
$53,190
Indirect Cost
Name
University of Maryland Baltimore
Department
Type
DUNS #
188435911
City
Baltimore
State
MD
Country
United States
Zip Code
21201
Sallmyr, Annahita; Tomkinson, Alan E (2018) Repair of DNA double-strand breaks by mammalian alternative end-joining pathways. J Biol Chem 293:10536-10546
Kerr, Candace; Adhikary, Gautam; Grun, Daniel et al. (2018) Combination cisplatin and sulforaphane treatment reduces proliferation, invasion, and tumor formation in epidermal squamous cell carcinoma. Mol Carcinog 57:3-11
Connolly, Sean; Quasi-Woode, Devona; Waldron, Laura et al. (2018) Calcineurin Regulatory Subunit Calcium-Binding Domains Differentially Contribute to Calcineurin Signaling in Saccharomyces cerevisiae. Genetics 209:801-813
Pauza, C David; Liou, Mei-Ling; Lahusen, Tyler et al. (2018) Gamma Delta T Cell Therapy for Cancer: It Is Good to be Local. Front Immunol 9:1305
Wang, Lei; Felts, Sara J; Van Keulen, Virginia P et al. (2018) Integrative Genome-Wide Analysis of Long Noncoding RNAs in Diverse Immune Cell Types of Melanoma Patients. Cancer Res 78:4411-4423
McCusker, Michael G; El Chaer, Firas; Duffy, Alison et al. (2018) Combination of Blinatumomab and Vincristine Sulfate Liposome Injection for Treatment of Relapsed Philadelphia Chromosome Positive B-cell Acute Lymphoblastic Leukemia. Am J Leuk Res 2:
Wang, Junxiang; Zhao, Liang; Ye, Yanfang et al. (2018) Adverse event detection by integrating twitter data and VAERS. J Biomed Semantics 9:19
Furusawa, Aki; Reiser, John; Sadashivaiah, Kavitha et al. (2018) Eomesodermin Increases Survival and IL-2 Responsiveness of Tumor-specific CD8+ T Cells in an Adoptive Transfer Model of Cancer Immunotherapy. J Immunother 41:53-63
Nathenson, Michael J; Conley, Anthony P; Sausville, Edward (2018) Immunotherapy: A New (and Old) Approach to Treatment of Soft Tissue and Bone Sarcomas. Oncologist 23:71-83
Wang, Lei; Felts, Sara J; Van Keulen, Virginia P et al. (2018) Exploring the effect of library preparation on RNA sequencing experiments. Genomics :

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