9.0 Abstract: Genomics Shared Service The mission of the Genomics Shared Service (GSS) is to provide cutting-edge genomic resources designed to empower high-impact cancer research at UMGCC. The GSS is a comprehensive resource that supports analysis of chromosomal abnormalities by karyotyping, cytogenomic array, and fluorescence in situ hybridization; gene expression profiling through microarray and RNAseq methodologies; and identification of sequence variation through Sanger-based and next-generation sequencing. Genomic resources support basic research and, through a College of American Pathologists?accredited lab environment that fosters clinical research, clinical trials and ultimately clinical care. The GSS spectrum of capabilities and expertise allows investigators a unique opportunity to make basic research discoveries and translate them into clinical care. Interactions between the GSS and other UMGCC shared services create comprehensive, seamless pipelines to facilitate access for UMGCC members. GSS staff members, who possess the expertise to help users define and refine study designs, interact with users to assess their research needs and provide appropriate expertise. These discussions often include consults with experts from the Biostatistics Shared Service. The GSS interacts extensively with other UMGCC shared services to obtain and process biospecimens and to analyze large, high-dimensional datasets resulting from genomic studies. Dr. Ambulos, director of GSS, is also UMGCC associate director for Shared Services. He ensures streamlined access by UMGCC members. The GSS is highly utilized. In 2014, it supported studies by 84 Cancer Center members (33 percent of all UMGCC members), spanning all 5 research programs; 49 percent of UMGCC users have peer-reviewed funding. The GSS supports many cancer-related publications annually, including papers in high-impact journals such as Proceedings of the National Academy of Sciences of the United States of America, Science, Science Translational Medicine, Nature Communications, Cancer Research, and JAMA.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
5P30CA134274-11
Application #
9537286
Study Section
Subcommittee I - Transistion to Independence (NCI)
Project Start
Project End
Budget Start
2018-08-01
Budget End
2019-07-31
Support Year
11
Fiscal Year
2018
Total Cost
Indirect Cost
Name
University of Maryland Baltimore
Department
Type
DUNS #
188435911
City
Baltimore
State
MD
Country
United States
Zip Code
21201
Wang, Junxiang; Zhao, Liang; Ye, Yanfang et al. (2018) Adverse event detection by integrating twitter data and VAERS. J Biomed Semantics 9:19
Furusawa, Aki; Reiser, John; Sadashivaiah, Kavitha et al. (2018) Eomesodermin Increases Survival and IL-2 Responsiveness of Tumor-specific CD8+ T Cells in an Adoptive Transfer Model of Cancer Immunotherapy. J Immunother 41:53-63
Nathenson, Michael J; Conley, Anthony P; Sausville, Edward (2018) Immunotherapy: A New (and Old) Approach to Treatment of Soft Tissue and Bone Sarcomas. Oncologist 23:71-83
Wang, Lei; Felts, Sara J; Van Keulen, Virginia P et al. (2018) Exploring the effect of library preparation on RNA sequencing experiments. Genomics :
Nathenson, Michael J; Barysauskas, Constance M; Nathenson, Robert A et al. (2018) Surgical resection for recurrent retroperitoneal leiomyosarcoma and liposarcoma. World J Surg Oncol 16:203
Sallmyr, Annahita; Tomkinson, Alan E (2018) Repair of DNA double-strand breaks by mammalian alternative end-joining pathways. J Biol Chem 293:10536-10546
Kerr, Candace; Adhikary, Gautam; Grun, Daniel et al. (2018) Combination cisplatin and sulforaphane treatment reduces proliferation, invasion, and tumor formation in epidermal squamous cell carcinoma. Mol Carcinog 57:3-11
Connolly, Sean; Quasi-Woode, Devona; Waldron, Laura et al. (2018) Calcineurin Regulatory Subunit Calcium-Binding Domains Differentially Contribute to Calcineurin Signaling in Saccharomyces cerevisiae. Genetics 209:801-813
Pauza, C David; Liou, Mei-Ling; Lahusen, Tyler et al. (2018) Gamma Delta T Cell Therapy for Cancer: It Is Good to be Local. Front Immunol 9:1305
Wang, Lei; Felts, Sara J; Van Keulen, Virginia P et al. (2018) Integrative Genome-Wide Analysis of Long Noncoding RNAs in Diverse Immune Cell Types of Melanoma Patients. Cancer Res 78:4411-4423

Showing the most recent 10 out of 257 publications