The study of obesity, nutrition, and metabolism relies on methods to measure feeding patterns, metabolic rate, activity, body composition, and fat distribution. Model organisms are a mainstay in the study of metabolism, obesity, and its consequences. Laboratory mice are the most fundamental and common models for studying in vivo physiology and disease pathophysiology, and the UCSF NORC Biomedical Mouse Metabolism Core (Core B) is specifically geared to measure a wide variety of metabolic parameters in mice, as well as in mouse and human tissues, and in cultured cells. The information gained by studying mice, which are often genetically modified through use of Core C (Genetics and Genomics) and examined in conjunction with epidemiological and behavioral studies done in humans (Core A), is essential to understand mechanisms underlying metabolic disease risk, and the potential effectiveness of nutritional and pharmacologic approaches to ameliorate obesity and its consequences. 21 of the 58 investigators in the proposed UCSF-NORC currently conduct research studies in which rodent models are monitored using the types of equipment and analytical approaches housed in Core B. Another 4 NORC investigators indicate that their research has developed to a point where their use of facilities in Core B is imminent. Experts in charge of running Core B keep abreast of the rapidly evolving application of these sophisticated methods, and ensure that NORC researchers are trained in their proper implementation. The presence of the facilities, and the availability of NORC support that is designed to assist the entry of NORC researchers into technologically unfamiliar areas, ensure the success of UCSF-NORC research. Core B provides access to, assistance with, and training in the use of sophisticated methods and instruments for those studies. Specifically, Core B provides tools and facilities for: 1. Precise and real-time measurement of feeding, energy expenditure, locomotor activities, respiratory exchange ratio, and thermoregulation in conscious mice. 2. Analyzing lean mass, fat mass, free and total body water in conscious mice, as well as bone mineral density and other aspects of body composition in anesthetized mice. 3. Cellular energetic measurements using the Seahorse FX24 Bioanalyzer, which measures the oxygen consumption rate (OCR) and extracellular acidification rate (ECAR) of live cells and tissues in a 24-well plate format. OCR and ECAR are key indicators of mitochondrial respiration and glycolysis, and provide a systems- level view of cellular metabolic function in cells and ex-vivo tissue samples from model organisms and humans. 4. Equipment for urine and fecal collection and blood pressure measurement. 5. Rodent incubators that allow for the study of mice under cold ambient or warm thermoneutral conditions. 6. Gnotobiotics service. Gnotobiotic technology enables breeding and maintenance of germ-free animals devoid of any associated microorganisms, including bacteria, archaea, microscopic fungi, parasites, and viruses. Most importantly, Core B provides non-invasive methods that permit mice to be followed over time. The ability to conduct longitudinal studies in mice is particularly significant for tracking the changes in body composition, feeding behavior, and metabolic activity that both trigger and respond to the development of obesity and its associated complications. Overall, this Core significantly lowers the methodologic barriers to help NORC researchers achieve the efficient and proper application of a series of highly sophisticated tools. These tools accelerate a variety of diverse and interrelated studies in obesity, nutrition, ingestive behavior, and metabolism.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Center Core Grants (P30)
Project #
2P30DK098722-06
Application #
10046237
Study Section
Special Emphasis Panel (ZDK1)
Project Start
Project End
Budget Start
2020-08-01
Budget End
2021-07-31
Support Year
6
Fiscal Year
2020
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Type
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94118
Jin, Yichen; DiPietro, Loretta; Kandula, Namratha R et al. (2018) Associations Between Television Viewing and Adiposity Among South Asians. J Racial Ethn Health Disparities 5:1059-1062
McQueen, Allison E; Koliwad, Suneil K; Wang, Jen-Chywan (2018) Fighting obesity by targeting factors regulating beige adipocytes. Curr Opin Clin Nutr Metab Care 21:437-443
Tharp, Kevin M; Kang, Michael S; Timblin, Greg A et al. (2018) Actomyosin-Mediated Tension Orchestrates Uncoupled Respiration in Adipose Tissues. Cell Metab 27:602-615.e4
Mehta, Anurag; Patel, Jaideep; Al Rifai, Mahmoud et al. (2018) Inflammation and coronary artery calcification in South Asians: The Mediators of Atherosclerosis in South Asians Living in America (MASALA) study. Atherosclerosis 270:49-56
Vohra, Mihir; Lemieux, George A; Lin, Lin et al. (2018) Kynurenic acid accumulation underlies learning and memory impairment associated with aging. Genes Dev 32:14-19
Kandula, Namratha R; Cooper, Andrew J; Schneider, John A et al. (2018) Personal social networks and organizational affiliation of South Asians in the United States. BMC Public Health 18:218
Deol, Rupinder; Lee, Kathryn A; Kandula, Namratha R et al. (2018) Risk of Obstructive Sleep Apnoea is Associated with Glycaemia Status in South Asian Men and Women in the United States. Obes Med 9:1-6
Hasegawa, Yutaka; Ikeda, Kenji; Chen, Yong et al. (2018) Repression of Adipose Tissue Fibrosis through a PRDM16-GTF2IRD1 Complex Improves Systemic Glucose Homeostasis. Cell Metab 27:180-194.e6
Miranda, Diego A; Krause, William C; Cazenave-Gassiot, Amaury et al. (2018) LRH-1 regulates hepatic lipid homeostasis and maintains arachidonoyl phospholipid pools critical for phospholipid diversity. JCI Insight 3:
Zhou, Mo; Fukuoka, Yoshimi; Mintz, Yonatan et al. (2018) Evaluating Machine Learning-Based Automated Personalized Daily Step Goals Delivered Through a Mobile Phone App: Randomized Controlled Trial. JMIR Mhealth Uhealth 6:e28

Showing the most recent 10 out of 179 publications