A novel metalloenzyme with two distinct isoforms has been identified in the methionine salvage pathway of Klebsiella pneumoniae. The enzyme, presently named E2, has been cloned and expressed in E. coli. Surprisingly, induction of the cloned gene results in overexpression of two distinct isoforms, E2 and ET, which are separable by chromatography. The two forms differ (at least in composition) only by their metal ion contents. Both enzymes catalyze the oxidative degradation of 1,2-dihydroxy-3-keto-5-methylthiopentene anion, but the product of the degradation depends upon the identity of the metal ion bound in the active site. Ni 12 bound in the active site results in the formation of carbon monoxide and formate from the degradative process. If Fe'2 is bound to the enzyme, only formate is produced. We have prepared a sample of the fully """"""""C,""""""""N-enriched Ni,2_Containing enzyme and have acquired spectra using the standard repertoire of triple resonance experiments (HN(CO)CA, HNCA, HNCACB, CBCA(CO)NH) and 13C-edited experiments (HCCH-TOCSY, 13C-filtered NOESY). Nearly complete 'H, """"""""C and """"""""N resonance assignments have been made for the native Ni"""""""" containing E2 enzyme, and a global fold for the enzyme has been determined. There is preliminary evidence that structural differences between the two isoforms may be due to the presence (in E2) or absence (in E2') of a disulfide bridge between the only two cysteines in the protein.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR000995-26
Application #
6449577
Study Section
Project Start
2001-05-01
Project End
2002-04-30
Budget Start
Budget End
Support Year
26
Fiscal Year
2001
Total Cost
Indirect Cost
Name
Massachusetts Institute of Technology
Department
Type
DUNS #
City
Cambridge
State
MA
Country
United States
Zip Code
02139
Marintchev, Assen; Edmonds, Katherine A; Marintcheva, Boriana et al. (2009) Topology and regulation of the human eIF4A/4G/4H helicase complex in translation initiation. Cell 136:447-60
Frueh, Dominique P; Arthanari, Haribabu; Koglin, Alexander et al. (2009) A double TROSY hNCAnH experiment for efficient assignment of large and challenging proteins. J Am Chem Soc 131:12880-1
Frueh, Dominique P; Leed, Alison; Arthanari, Haribabu et al. (2009) Time-shared HSQC-NOESY for accurate distance constraints measured at high-field in (15)N-(13)C-ILV methyl labeled proteins. J Biomol NMR 45:311-8
Lentz, Margaret R; Westmoreland, Susan V; Lee, Vallent et al. (2008) Metabolic markers of neuronal injury correlate with SIV CNS disease severity and inoculum in the macaque model of neuroAIDS. Magn Reson Med 59:475-84
Hyberts, Sven G; Heffron, Gregory J; Tarragona, Nestor G et al. (2007) Ultrahigh-resolution (1)H-(13)C HSQC spectra of metabolite mixtures using nonlinear sampling and forward maximum entropy reconstruction. J Am Chem Soc 129:5108-16
Chen, Jingyang; Dupradeau, Francois-Yves; Case, David A et al. (2007) Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites. Biochemistry 46:3096-107
Lentz, Margaret R; Kim, John P; Westmoreland, Susan V et al. (2005) Quantitative neuropathologic correlates of changes in ratio of N-acetylaspartate to creatine in macaque brain. Radiology 235:461-8
Kim, John P; Lentz, Margaret R; Westmoreland, Susan V et al. (2005) Relationships between astrogliosis and 1H MR spectroscopic measures of brain choline/creatine and myo-inositol/creatine in a primate model. AJNR Am J Neuroradiol 26:752-9
Peled, S; Cory, D G; Raymond, S A et al. (1999) Water diffusion, T(2), and compartmentation in frog sciatic nerve. Magn Reson Med 42:911-8
Mo, H; Dai, Y; Pochapsky, S S et al. (1999) 1H, 13C and 15N NMR assignments for a carbon monoxide generating metalloenzyme from Klebsiella pneumoniae. J Biomol NMR 14:287-8

Showing the most recent 10 out of 12 publications