This subproject is one of many research subprojects utilizing theresources provided by a Center grant funded by NIH/NCRR. The subproject andinvestigator (PI) may have received primary funding from another NIH source,and thus could be represented in other CRISP entries. The institution listed isfor the Center, which is not necessarily the institution for the investigator.The broad, long term objective of the proposed research is to develop a high speed noninvasive endoscopic functional optical coherence tomographic (OCT) system using microelectromechanical system (MEMS) technology for early diagnosis of tumors in gastrointestinal (GI), respiratory, and urogenital tracts. Functional optical coherence tomography uses coherent gating techniques to obtain information on tissue structure and blood flow dynamics at discrete spatial locations in highly scattering biological tissues. The exceptionally high spatial resolution (2~10 5m) of functional OCT allows noninvasive imaging of both in vivo tissue structure and blood flow dynamics simultaneously. We propose to combine the advances in biomedical imaging and MEMS technology to develop a high speed, compact, and fast endoscopic functional OCT with a miniaturized probe. This is a collaborative project that involves principal investigators with expertise in biomedical optics, endoscopic imaging, and silicon and polymer MEMS technology.
The specific aims of this work are to: 1) design and develop a high speed, fiber optic based high resolution functional OCT system for endoscopic imaging of in vivo tissue structure and blood flow dynamics in GI tracks, and investigate and develop hardware systems and imaging processing algorithms for speckle noise minimization and imaging enhancement; 2) develop scanning probes with silicon MEMS technology; 3) develop scanning probes with polymer MEMS technology; and 4) Integrate and characterize endoscopic system. Several novel concepts are proposed in the design and development of endoscopic functional OCT. First, miniaturized scanning probe is designed and developed using both silicon and polymer MEMS technology. The scanning probes developed using MEMS technology have the advantage that they are compact, robust, low cost, low power requirement, and high speed. In addition, OCT is a coherent imaging technique that depends upon the spati al and temporal coherence of the optical waves for image detection. This same coherence also gives rise to speckle, which degrades the quality of functional images and makes boundaries between highly scattering structures in tissue difficult to resolve. Hardware and imaging processing algorithms for speckle noise reduction will be investigated to increase the quality of functional OCT image. Furthermore, lateral resolution of the current endoscopic OCT that uses axial scanning followed by lateral scanning is limited by the focal depth of the probe beam. The high scanning rate of the probe made with MEMS technology offers the potential to increase lateral resolution by performing lateral scanning first in order to maintain the beam waist at the zero optical path length. Finally, a scanning probe fabricated with MEMS technology has the potential to provide three-dimensional imaging of tissue structure and physiology with high imaging speed. Although not a focus of this proposal, the scanning probe technology developed in this proposal can also be used for endoscopic confocal and two-photon imaging.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
2P41RR001192-29
Application #
7722500
Study Section
Special Emphasis Panel (ZRG1-SBIB-L (40))
Project Start
2008-04-15
Project End
2009-03-31
Budget Start
2008-04-15
Budget End
2009-03-31
Support Year
29
Fiscal Year
2008
Total Cost
$6,670
Indirect Cost
Name
University of California Irvine
Department
Physiology
Type
Schools of Medicine
DUNS #
046705849
City
Irvine
State
CA
Country
United States
Zip Code
92697
Paugh, Jerry R; Alfonso-Garcia, Alba; Nguyen, Andrew Loc et al. (2018) Characterization of expressed human meibum using hyperspectral stimulated Raman scattering microscopy. Ocul Surf :
Verdel, Nina; Lentsch, Griffin; Balu, Mihaela et al. (2018) Noninvasive assessment of skin structure by combined photothermal radiometry and optical spectroscopy: coregistration with multiphoton microscopy. Appl Opt 57:D117-D122
Friedman, Jacob E; Dobrinskikh, Evgenia; Alfonso-Garcia, Alba et al. (2018) Pyrroloquinoline quinone prevents developmental programming of microbial dysbiosis and macrophage polarization to attenuate liver fibrosis in offspring of obese mice. Hepatol Commun 2:313-328
Kennedy, Gordon T; Lentsch, Griffin R; Trieu, Brandon et al. (2017) Solid tissue simulating phantoms having absorption at 970 nm for diffuse optics. J Biomed Opt 22:76013
Takesh, Thair; Sargsyan, Anik; Lee, Matthew et al. (2017) Evaluating the Whitening and Microstructural Effects of a Novel Whitening Strip on Porcelain and Composite Dental Materials. Dentistry (Sunnyvale) 7:
Jonscher, Karen R; Stewart, Michael S; Alfonso-Garcia, Alba et al. (2017) Early PQQ supplementation has persistent long-term protective effects on developmental programming of hepatic lipotoxicity and inflammation in obese mice. FASEB J 31:1434-1448
Alfonso-García, Alba; Paugh, Jerry; Farid, Marjan et al. (2017) A machine learning framework to analyze hyperspectral stimulated Raman scattering microscopy images of expressed human meibum. J Raman Spectrosc 48:803-812
Takesh, Thair; Sargsyan, Anik; Anbarani, Afarin et al. (2017) Effects of a Novel Whitening Formulation on Dental Enamel. Dentistry (Sunnyvale) 7:
Malacrida, Leonel; Astrada, Soledad; Briva, Arturo et al. (2016) Spectral phasor analysis of LAURDAN fluorescence in live A549 lung cells to study the hydration and time evolution of intracellular lamellar body-like structures. Biochim Biophys Acta 1858:2625-2635
Choi, Bernard; Tan, Wenbin; Jia, Wangcun et al. (2016) The Role of Laser Speckle Imaging in Port-Wine Stain Research: Recent Advances and Opportunities. IEEE J Sel Top Quantum Electron 2016:

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