This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. Exploration of protein folds by X-ray crystallography is a basis of modern structural biology. It is generally believed that functionally relevant proteins form a limited number of folding families which can be mapped by the high-throughput methods of protein crystallography and NMR. The C. elegans genome, with approximately 19000 predicted genes, provides opportunity for structural studies of a small eukaryotic organism and has been selected as a target by the Southeast Collaboratory for Structural Genomics. Although a significant progress has been made in production and crystallization of the C. elegans proteins, availability of the synchrotron beam time is still limited. We propose a series of diffraction experiments directed towards MAD/SAD phasing of the novel protein structures from C. elegans. A majority of the proteins will be either derivatized by heavy atom reagents or produced as selenomethionine/selenocysteine variants. Based on the current production, we estimate data collection for 10-15 proteins.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR001209-27
Application #
7370480
Study Section
Special Emphasis Panel (ZRG1-BPC-E (40))
Project Start
2006-03-01
Project End
2007-02-28
Budget Start
2006-03-01
Budget End
2007-02-28
Support Year
27
Fiscal Year
2006
Total Cost
$219
Indirect Cost
Name
Stanford University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
009214214
City
Stanford
State
CA
Country
United States
Zip Code
94305
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