The goal is (1) to explore the possibility of deeper level of modeling, namely, incorporating mitochondria into our current nonlinear oxygen model; (2) to test the robustness of estimating regional MVO2 in the presence of noise; and (3) to analyze the PET data using this model. The first goal requires better understanding of mitochondria distribution and kinetics. The second goal is essential for developing a new noninvasive technique in measuring regional oxygen consumption using PET and O-15 oxygen. With the PET scan, only the residue function is available so we need to find out how big the error will be if using only the residue function instead of both residue and outflow dilution curves. In the presence of noise when small regions of interest (ROI) are used, we need to find out what is the smallest ROI size we can use and how that will affect the estimates of model parameters, especially MVO2. Monte Carlo simulation will be used for this task.Different levels of noise will be added to simulated data and the model will be fitted to many curves at the same noise level. The third goal can be achieved by analyzing more PET data from our dog experiments.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR001243-19
Application #
6308562
Study Section
Project Start
1999-12-01
Project End
2000-11-30
Budget Start
1998-10-01
Budget End
1999-09-30
Support Year
19
Fiscal Year
2000
Total Cost
$23,494
Indirect Cost
Name
University of Washington
Department
Type
DUNS #
135646524
City
Seattle
State
WA
Country
United States
Zip Code
98195
Bassingthwaighte, James B; Butterworth, Erik; Jardine, Bartholomew et al. (2012) Compartmental modeling in the analysis of biological systems. Methods Mol Biol 929:391-438
Dash, Ranjan K; Bassingthwaighte, James B (2010) Erratum to: Blood HbO2 and HbCO2 dissociation curves at varied O2, CO2, pH, 2,3-DPG and temperature levels. Ann Biomed Eng 38:1683-701
Bassingthwaighte, James B; Raymond, Gary M; Butterworth, Erik et al. (2010) Multiscale modeling of metabolism, flows, and exchanges in heterogeneous organs. Ann N Y Acad Sci 1188:111-20
Dash, Ranjan K; Bassingthwaighte, James B (2006) Simultaneous blood-tissue exchange of oxygen, carbon dioxide, bicarbonate, and hydrogen ion. Ann Biomed Eng 34:1129-48
Dash, Ranjan K; Bassingthwaighte, James B (2004) Blood HbO2 and HbCO2 dissociation curves at varied O2, CO2, pH, 2,3-DPG and temperature levels. Ann Biomed Eng 32:1676-93
Kellen, Michael R; Bassingthwaighte, James B (2003) Transient transcapillary exchange of water driven by osmotic forces in the heart. Am J Physiol Heart Circ Physiol 285:H1317-31
Kellen, Michael R; Bassingthwaighte, James B (2003) An integrative model of coupled water and solute exchange in the heart. Am J Physiol Heart Circ Physiol 285:H1303-16
Wang, C Y; Bassingthwaighte, J B (2001) Capillary supply regions. Math Biosci 173:103-14
Swanson, K R; True, L D; Lin, D W et al. (2001) A quantitative model for the dynamics of serum prostate-specific antigen as a marker for cancerous growth: an explanation for a medical anomaly. Am J Pathol 158:2195-9
Beard, D A; Bassingthwaighte, J B (2000) Advection and diffusion of substances in biological tissues with complex vascular networks. Ann Biomed Eng 28:253-68

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