This renewal seeks support to continue to maintain, promote and facilitate the effective and timely usage of the advanced and developing techniques of computerized mass spectrometry for the express purpose of solving biochemical, biological and medical research problems involving questions of key scientific significance which may be addressed by obtaining new experimental structural insight and identification at the molecular level. The program will continue to make available to investigators (both scientists and clinicians) in virtually all biological and medical research fields, the state-of-the-art techniques in high performance mass spectrometry and the facility staff expertise which are both essential for the successful symbiotic application of such advanced methodology and instrumentation to their individual research problems. We will continue to foster purposefully the salient ingredients pertinent to presently successful facility operations including the requirements for: 1) structure elucidation for covalently modified biopolymers of all types - usually polar, polyfunctional and labile in nature; 2) studies on the qualitative and quantitative composition of complex mixtures of polar, labile substances isolated from biological materials. The corresponding salient features of our methodology arsenal includes the requirements for: 1) the complementary """"""""soft ionization"""""""" sample ion sources; 2) the new highest sensitivity ion optical systems possessing state-of-the-art mass ranges (approximately 10,000-15,000 dalton); 3) new instrumental strategies for signal enhancement and elimination of chemical/matrix associated, etc. """"""""noise""""""""; and spectral accumulation methods; 4) relevant computer system support of instrumentation; and 5) essential isolation, degradation and chromatographic separation methodology for core and collaborative problem development. Specific problem areas of biomedical and clinical research importance include: the metabolism, conjugation and macro-molecular covalent binding of endogenous and xenobiotic substances, the molecular basis of toxicity, chemical and oncogenic carcinogenesis, nature of glycoconjugates in inter-molecular recognition (antigenic determinants, etc.), and genetic disorders, etc.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
2P41RR001614-05
Application #
3103907
Study Section
(BET)
Project Start
1982-03-01
Project End
1991-02-28
Budget Start
1986-03-01
Budget End
1987-02-28
Support Year
5
Fiscal Year
1986
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Type
Schools of Pharmacy
DUNS #
073133571
City
San Francisco
State
CA
Country
United States
Zip Code
94143
MacRae, Andrew J; Mayerle, Megan; Hrabeta-Robinson, Eva et al. (2018) Prp8 positioning of U5 snRNA is linked to 5' splice site recognition. RNA 24:769-777
Katsuno, Yoko; Qin, Jian; Oses-Prieto, Juan et al. (2018) Arginine methylation of SMAD7 by PRMT1 in TGF-?-induced epithelial-mesenchymal transition and epithelial stem-cell generation. J Biol Chem 293:13059-13072
Sahoo, Pabitra K; Smith, Deanna S; Perrone-Bizzozero, Nora et al. (2018) Axonal mRNA transport and translation at a glance. J Cell Sci 131:
Tran, Vy M; Wade, Anna; McKinney, Andrew et al. (2017) Heparan Sulfate Glycosaminoglycans in Glioblastoma Promote Tumor Invasion. Mol Cancer Res 15:1623-1633
Liu, Tzu-Yu; Huang, Hector H; Wheeler, Diamond et al. (2017) Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics. Cell Syst 4:636-644.e9
Julien, Olivier; Zhuang, Min; Wiita, Arun P et al. (2016) Quantitative MS-based enzymology of caspases reveals distinct protein substrate specificities, hierarchies, and cellular roles. Proc Natl Acad Sci U S A 113:E2001-10
Bongrand, Clotilde; Koch, Eric J; Moriano-Gutierrez, Silvia et al. (2016) A genomic comparison of 13 symbiotic Vibrio fischeri isolates from the perspective of their host source and colonization behavior. ISME J 10:2907-2917
Kintzer, Alexander F; Stroud, Robert M (2016) Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana. Nature 531:258-62
Bikle, Daniel D (2016) Extraskeletal actions of vitamin D. Ann N Y Acad Sci 1376:29-52
Twiss, Jeffery L; Fainzilber, Mike (2016) Neuroproteomics: How Many Angels can be Identified in an Extract from the Head of a Pin? Mol Cell Proteomics 15:341-3

Showing the most recent 10 out of 630 publications