We are working with medicinal chemists to design inhibitors of clinically-troublesome bacterial ?-lactamases, which provide resistance to penicillins and cephalosporins. By working at cryogenic temperatures, we hope to stabilize and visualize reaction intermediates in the inhibition pathway. Four ?-lactam complexes of two class C ?-lactamases from Enterobacter cloacae (P99 and GC1) were examined at 100-K on beamline A1 with the 2k Princeton detector in binned mode. Aztreonam and ampicillin were complexed with the GC1 enzyme, and potential inhibitors KM233 and DVR3 were complexed with the P99 enzyme. The P99 and GC1 complexes gave data to about 2.7 ? and 2.3 ? resolution, respectively. Initial phasing will be based on the known native structures. Maps of the GC1 complexes are now being examined. New crystals of the plasmid-mediated SHV class A ?-lactamase were characterized. The small crystals (25x75 microns) diffracted to 2.4 ? resolution. A poorly resolved reciprocal spacing on the Princeton detector, estimated to be about 250 ?-1, has hindered indexing by DENZO so that XGEN will be used instead. Because there appear to at least 4 copies of the molecule per asymmetric unit, we may not continue to use this crystal form. In the remaining time, new 50 micron crystals of vanB, an aminoacid ligase providing vancomycin resistance to enterococci, were quickly characterized in order to plan for future work and were found to diffract to about 4 ?, for a monoclinic cell with 85x83x83 ? and ?=99-.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
3P41RR001646-16S1
Application #
6120504
Study Section
Project Start
1998-09-15
Project End
1999-08-14
Budget Start
1998-10-01
Budget End
1999-09-30
Support Year
16
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Cornell University
Department
Type
DUNS #
City
Ithaca
State
NY
Country
United States
Zip Code
14850
Kozlov, Guennadi; Wong, Kathy; Gehring, Kalle (2018) Crystal structure of the Legionella effector Lem22. Proteins 86:263-267
Ménade, Marie; Kozlov, Guennadi; Trempe, Jean-François et al. (2018) Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations. J Biol Chem 293:12832-12842
Xu, Jie; Kozlov, Guennadi; McPherson, Peter S et al. (2018) A PH-like domain of the Rab12 guanine nucleotide exchange factor DENND3 binds actin and is required for autophagy. J Biol Chem 293:4566-4574
Dean, Dexter N; Rana, Pratip; Campbell, Ryan P et al. (2018) Propagation of an A? Dodecamer Strain Involves a Three-Step Mechanism and a Key Intermediate. Biophys J 114:539-549
Chen, Yu Seby; Kozlov, Guennadi; Fakih, Rayan et al. (2018) The cyclic nucleotide-binding homology domain of the integral membrane protein CNNM mediates dimerization and is required for Mg2+ efflux activity. J Biol Chem 293:19998-20007
Lucido, Michael J; Orlando, Benjamin J; Vecchio, Alex J et al. (2016) Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry. Biochemistry 55:1226-38
Bauman, Joseph D; Harrison, Jerry Joe E K; Arnold, Eddy (2016) Rapid experimental SAD phasing and hot-spot identification with halogenated fragments. IUCrJ 3:51-60
Xu, Caishuang; Kozlov, Guennadi; Wong, Kathy et al. (2016) Crystal Structure of the Salmonella Typhimurium Effector GtgE. PLoS One 11:e0166643
Cogliati, Massimo; Zani, Alberto; Rickerts, Volker et al. (2016) Multilocus sequence typing analysis reveals that Cryptococcus neoformans var. neoformans is a recombinant population. Fungal Genet Biol 87:22-9
Oot, Rebecca A; Kane, Patricia M; Berry, Edward A et al. (2016) Crystal structure of yeast V1-ATPase in the autoinhibited state. EMBO J 35:1694-706

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