The ribosome is a massive RNA-protein complex that catalyzes template-directed protein synthesis in all cells. As the machine that converts genetic information into a biological phenotype, understanding the structural basis for ribosome function is of central importance to biology. We have grown square prisms of T. thermophilus 70S ribosomes ranging in size from 300-500 micrometers. On a rotating-anode source, these crystals diffract to approximately 25 Angstrom resolution. However, based on data collected at CHESS beamline F1, these same crystals diffract to ~8 Angstrom resolution. We used the beamtime at CHESS for two purposes. First, we wanted to determine the diffraction limit of our present 70S ribosome crystals. We found that, although our native crystals varied in quality, we were able to obtain data with mean I/sigma(I) > 2 at 8.2 Angstrom resolution. Second, we wanted to continue screening for potential heavy-atom derivatives to phase the structure factor amplitudes. By using molecular replacement phases, we had identified heavy-atom derivatives in a previous crystal form. We are therefore repeating the search in these new crystals. Several partial and complete data sets collected at CHESS are being used for this purpose. A molecular replacement solution has been determined and difference Fourier analyses are presently underway.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
3P41RR001646-16S1
Application #
6120545
Study Section
Project Start
1998-09-15
Project End
1999-08-14
Budget Start
1998-10-01
Budget End
1999-09-30
Support Year
16
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Cornell University
Department
Type
DUNS #
City
Ithaca
State
NY
Country
United States
Zip Code
14850
Kozlov, Guennadi; Wong, Kathy; Gehring, Kalle (2018) Crystal structure of the Legionella effector Lem22. Proteins 86:263-267
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Xu, Jie; Kozlov, Guennadi; McPherson, Peter S et al. (2018) A PH-like domain of the Rab12 guanine nucleotide exchange factor DENND3 binds actin and is required for autophagy. J Biol Chem 293:4566-4574
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Oot, Rebecca A; Kane, Patricia M; Berry, Edward A et al. (2016) Crystal structure of yeast V1-ATPase in the autoinhibited state. EMBO J 35:1694-706
Lucido, Michael J; Orlando, Benjamin J; Vecchio, Alex J et al. (2016) Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry. Biochemistry 55:1226-38
Bauman, Joseph D; Harrison, Jerry Joe E K; Arnold, Eddy (2016) Rapid experimental SAD phasing and hot-spot identification with halogenated fragments. IUCrJ 3:51-60

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