This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. The initial source of Earth s organic carbon is atmospheric or dissolved CO2, which is fixed by enzymes found in green plants, algae and autotrophic bacteria. The carbon is then spread through the food chain to all other living organisms. The most important enzyme responsible for fixing carbon is ribulose bisphosphate carboxylase/oxygenase (RuBisCO), which catalyzes the first step in carbon fixation via the Calvin-Benson-Bassham cycle - the covalent attachment of CO2 to ribulose-1,5-bisphosphate and its subsequent cleavage into two molecules of 3-phosphoglycerate. Based on the immense biomass of photosynthetic and chemoautotrophic organisms on Earth, RuBisCO is estimated to be the most abundant protein known. All cyanobacteria and some chemoautotrophic bacteria enhance their CO2 fixation by sequestering RuBisCO into polyhedral bodies called carboxysomes. Halothiobacillus neapolitanus carboxysomes are delimited by a proteinaceous shell and are filled with RuBisCO. In previous electron microscopic studies, carboxysomes appeared hexagonal with a granular interior, a diameter of approximately 120 nm and a shell thickness of between 3 to 4 nm 8; 9. Although the enhancement of carbon dioxide fixation by the carboxysome has been firmly established, the exact mechanism has not yet been elucidated. Although much has been published on the occurrence, physiology, biochemistry and genetics of these microcompartments/organelles, only two major reports have analyzed the structure or symmetry of purified carboxysomes. Peters concluded that the carboxysomes of Nitrobacter agilis obey icosahedral symmetry, based on negative stain projection images and heavy-metal shadowing of critical-point-dried carboxysomes Holthuijzen and co-workers, on the other hand, reported the shape of carboxysomes of H. neapolitanus to be dodecahedral. We propose to use cryoEM to determine the molecular structure of ca. rboxysomes of H. neapolitanus

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR002250-21
Application #
7357815
Study Section
Special Emphasis Panel (ZRG1-BPC-K (40))
Project Start
2005-12-01
Project End
2006-11-30
Budget Start
2005-12-01
Budget End
2006-11-30
Support Year
21
Fiscal Year
2006
Total Cost
$30,117
Indirect Cost
Name
Baylor College of Medicine
Department
Physiology
Type
Schools of Medicine
DUNS #
051113330
City
Houston
State
TX
Country
United States
Zip Code
77030
Bucero, Marta Abril; Bajaj, Chandrajit; Mourrain, Bernard (2016) On the construction of general cubature formula by flat extensions. Linear Algebra Appl 502:104-125
Ebeida, Mohamed S; Rushdi, Ahmad A; Awad, Muhammad A et al. (2016) Disk Density Tuning of a Maximal Random Packing. Comput Graph Forum 35:259-269
Wensel, Theodore G; Zhang, Zhixian; Anastassov, Ivan A et al. (2016) Structural and molecular bases of rod photoreceptor morphogenesis and disease. Prog Retin Eye Res 55:32-51
Baker, Mariah R; Fan, Guizhen; Serysheva, Irina I (2015) Single-Particle Cryo-EM of the Ryanodine Receptor Channel in an Aqueous Environment. Eur J Transl Myol 25:4803
Rushdi, Ahmad A; Mitchell, Scott A; Bajaj, Chandrajit L et al. (2015) Robust All-quad Meshing of Domains with Connected Regions. Procedia Eng 124:96-108
Edwards, John; Daniel, Eric; Pascucci, Valerio et al. (2015) Approximating the Generalized Voronoi Diagram of Closely Spaced Objects. Comput Graph Forum 34:299-309
Wensel, Theodore G; Gilliam, Jared C (2015) Three-dimensional architecture of murine rod cilium revealed by cryo-EM. Methods Mol Biol 1271:267-92
Jeter, Cameron B; Patel, Saumil S; Morris, Jeffrey S et al. (2015) Oculomotor executive function abnormalities with increased tic severity in Tourette syndrome. J Child Psychol Psychiatry 56:193-202
Zhang, Qin; Cha, Deukhyun; Bajaj, Chandrajit (2015) Quality Partitioned Meshing of Multi-Material Objects. Procedia Eng 124:187-199
Baker, Mariah R; Fan, Guizhen; Serysheva, Irina I (2015) Single-particle cryo-EM of the ryanodine receptor channel in an aqueous environment. Eur J Transl Myol 25:35-48

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