This subproject is one of many research subprojects utilizing theresources provided by a Center grant funded by NIH/NCRR. The subproject andinvestigator (PI) may have received primary funding from another NIH source,and thus could be represented in other CRISP entries. The institution listed isfor the Center, which is not necessarily the institution for the investigator.Bacteriophage HK97 is a lambda-like, tailed dsDNA bacteriophage that has emerged as a highly accessible model system for studies of particle assembly and maturation. This system allows a number of intermediate particle states to be isolated and characterized and hence provides excellent opportunities for detailed structural and biophysical analysis of complex macromolecular assembly.The HK97 prohead is composed of 420 copies of a 42kDa capsid protein that assemble into an T=7l icosahedral shell, called Prohead-I. Approximately 60 copies of the phage-encoded protease are packaged into the Prohead-I shell during assembly. After the capsid is formed, the protease cleaves off residues 2-103, called the ∆-domain, from the capsid proteins. The ∆-domain is a scaffolding protein and a crucial component for directing the capsid subunits to assemble into an icosahedral particle. After proteolysis, the resulting particle, called Prohead-II, resembles Prohead-I on the exterior, however the interior surface has been completely remodeled as a result of removal of the ∆-domains. Prohead-II enters the maturation cascade by capsid expansion and intersubunit crosslinking.In this proposal, we seek to determine a high resolution atomic structure of Prohead-I and Prohead-II by X-ray crystallography. The structure will allow us to compare subunit conformations and inter/intra capsomer interactions in the proheads with organizations previously observed in mature capsid states. A detailed structure will also help us to fully understand the determinants of virus assembly and the biophysical mechanism of capsid maturation.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
2P41RR007707-16A1
Application #
7725996
Study Section
Special Emphasis Panel (ZRG1-BCMB-P (40))
Project Start
2008-09-01
Project End
2009-07-31
Budget Start
2008-09-01
Budget End
2009-07-31
Support Year
16
Fiscal Year
2008
Total Cost
$7,908
Indirect Cost
Name
University of Chicago
Department
Miscellaneous
Type
Schools of Medicine
DUNS #
005421136
City
Chicago
State
IL
Country
United States
Zip Code
60637
Weingarten, Adam S; Dannenhoffer, Adam J; Kazantsev, Roman V et al. (2018) Chromophore Dipole Directs Morphology and Photocatalytic Hydrogen Generation. J Am Chem Soc 140:4965-4968
Yang, Cheolhee; Choi, Minseo; Kim, Jong Goo et al. (2018) Protein Structural Dynamics of Wild-Type and Mutant Homodimeric Hemoglobin Studied by Time-Resolved X-Ray Solution Scattering. Int J Mol Sci 19:
Kazantsev, Roman V; Dannenhoffer, Adam J; Weingarten, Adam S et al. (2017) Crystal-Phase Transitions and Photocatalysis in Supramolecular Scaffolds. J Am Chem Soc 139:6120-6127
Fournier, Bertrand; Sokolow, Jesse; Coppens, Philip (2016) Analysis of multicrystal pump-probe data sets. II. Scaling of ratio data sets. Acta Crystallogr A Found Adv 72:250-60
Cho, Hyun Sun; Schotte, Friedrich; Dashdorj, Naranbaatar et al. (2016) Picosecond Photobiology: Watching a Signaling Protein Function in Real Time via Time-Resolved Small- and Wide-Angle X-ray Scattering. J Am Chem Soc 138:8815-23
Pande, Kanupriya; Hutchison, Christopher D M; Groenhof, Gerrit et al. (2016) Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein. Science 352:725-9
Mariette, Céline; Guérin, Laurent; Rabiller, Philippe et al. (2015) The creation of modulated monoclinic aperiodic composites in n-alkane/urea compounds. Z Kristallogr Cryst Mater 230:5-11
Yang, Xiaojing; Stojkovi?, Emina A; Ozarowski, Wesley B et al. (2015) Light Signaling Mechanism of Two Tandem Bacteriophytochromes. Structure 23:1179-89
Liu, Yue; Sheng, Ju; Fokine, Andrei et al. (2015) Structure and inhibition of EV-D68, a virus that causes respiratory illness in children. Science 347:71-4
Coppens, Philip; Fournier, Bertrand (2015) On the scaling of multicrystal data sets collected at high-intensity X-ray and electron sources. Struct Dyn 2:064101

Showing the most recent 10 out of 120 publications