This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. Primary support for the subproject and the subproject's principal investigator may have been provided by other sources, including other NIH sources. The Total Cost listed for the subproject likely represents the estimated amount of Center infrastructure utilized by the subproject, not direct funding provided by the NCRR grant to the subproject or subproject staff. Time-resolved Studies of Molecular Excited States and Chemical Reactions Beamtime is requested for photocrystallographic time-resolved experiments using single- and multi-pulse Laue diffraction. As part of the project experimental and data-reduction methods are being revised to maximize the accuracy of the Laue intensities and the optical resolution. We are using the 'seed-skewness'method of spot integration (Bolotovsky &Coppens J. Appl. Cryst. 30 244-253 1997)which is profile-independent and well suited for the profile changes observed at different time point in the 100ps-1 ms delay range in time-resolved Laue experiment. We are analyzing instabilities in the single-pulse intensities in collaboration with Tim Graber who has identified several sources of the fluctuations in very recent test experiments. Knowledge of the geometry changes of molecules on excitation and their relation to lifetimes and adsorption of chromophores on substrates is of crucial importance for the design of molecular devices used in light capture. In photovoltaic cells sensitizer-dye molecules are adsorbed on a semiconductor surface which is typically composed of the anatase phase of titanium dioxide. The proposed work involves crystalline phases of titanium dioxide nanoclusters which reproduce the surface characteristics of the anatase phase. The periodic arrangement of the nanoclusters in these materials allows detailed X-ray diffraction determination of the geometry of the adsorbed molecules in their ground state and by use of ultrafast time-resolved pump-probe diffraction methods at picoseconds-resolution determination of the geometry changes of both the adsorbent and the substrate on excitation by light. The structural results are to be correlated with spectroscopic measurements and theoretical calculations to obtain atomic-resolution understanding of the processes that take place on molecule-coated semiconductor surfaces as a result of light exposure. A second goal of the project is the study of initial stages of chemical reactions of molecules in neat crystals as well as of of molecules embedded in framework supramolecular solids. Reactions of interest include isomerizations such as the trans-cis isomerization triggering the reaction of photoactive yellow protein dimerization and ring closure reactions. Whereas the relatively slow progress of such reactions can be studied with conventional equipment and laser excitation the initial stages and in particular the nature of short-lived transition states and other intermediates requires pump-probe techniques with pulsed X-ray and light sources. The work is funded by DOE (first part) and by NSF (second part).

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR007707-19
Application #
8363703
Study Section
Special Emphasis Panel (ZRG1-BCMB-P (40))
Project Start
2011-08-01
Project End
2012-07-31
Budget Start
2011-08-01
Budget End
2012-07-31
Support Year
19
Fiscal Year
2011
Total Cost
$54,735
Indirect Cost
Name
University of Chicago
Department
Miscellaneous
Type
Schools of Medicine
DUNS #
005421136
City
Chicago
State
IL
Country
United States
Zip Code
60637
Weingarten, Adam S; Dannenhoffer, Adam J; Kazantsev, Roman V et al. (2018) Chromophore Dipole Directs Morphology and Photocatalytic Hydrogen Generation. J Am Chem Soc 140:4965-4968
Yang, Cheolhee; Choi, Minseo; Kim, Jong Goo et al. (2018) Protein Structural Dynamics of Wild-Type and Mutant Homodimeric Hemoglobin Studied by Time-Resolved X-Ray Solution Scattering. Int J Mol Sci 19:
Kazantsev, Roman V; Dannenhoffer, Adam J; Weingarten, Adam S et al. (2017) Crystal-Phase Transitions and Photocatalysis in Supramolecular Scaffolds. J Am Chem Soc 139:6120-6127
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Pfoh, Roland; Pai, Emil F; Saridakis, Vivian (2015) Nicotinamide mononucleotide adenylyltransferase displays alternate binding modes for nicotinamide nucleotides. Acta Crystallogr D Biol Crystallogr 71:2032-9
Mariette, Céline; Guérin, Laurent; Rabiller, Philippe et al. (2015) The creation of modulated monoclinic aperiodic composites in n-alkane/urea compounds. Z Kristallogr Cryst Mater 230:5-11
Yang, Xiaojing; Stojkovi?, Emina A; Ozarowski, Wesley B et al. (2015) Light Signaling Mechanism of Two Tandem Bacteriophytochromes. Structure 23:1179-89

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