This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. One of the main ways animals respond to low oxygen concentration is through an alpha/beta heterodimer transcription factor, hypoxia inducible factor (HIF). During hypoxia, HIF binds to response elements linked to an array of genes associated with hypoxia including, in humans, those associated with angiogenesis (VEGF) and erythropoiesis (erythropoietin, EPO). Levels of the alpha subunit of HIF are low under normoxic conditions and increase under hypoxic conditions. The post-translational enzymatic hydroxylation of proline at either of two sites, targets HIF-alpha to the von Hipple Lindau protein (pVHL), which in turn recruits a ubiquitin ligase enabling HIF-alpha's proteasomal degradation. Regulation of HIF-alpha levels and its transcriptional activity are mediated by prolyl hydoxylase isozymes PHD1,2,and 3 and an asparaginyl hydroxylase, factor inhibiting HIF (FIH), both of which utilize molecular oxygen and 2-oxoglutarate (2OG) as substrates and thus act as direct oxygen level sensors. Both types of hydroxylases belong to the 2-OG dependent non-haem iron dioxygenase family of enzymes. There is great therapuetic potential through the modulation of transcription factors using small molecules and/or peptides. Specific inhibition of the HIF hydroxylases may not only provide a useful means of initiating angiogenesis, but may also provide valuable information on the poorly understood functional roles of the individual hydroxylases in cell signaling.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR012408-10
Application #
7358958
Study Section
Special Emphasis Panel (ZRG1-PC (02))
Project Start
2006-07-01
Project End
2007-06-30
Budget Start
2006-07-01
Budget End
2007-06-30
Support Year
10
Fiscal Year
2006
Total Cost
$3,815
Indirect Cost
Name
Brookhaven National Laboratory
Department
Type
DUNS #
027579460
City
Upton
State
NY
Country
United States
Zip Code
11973
Sui, Xuewu; Farquhar, Erik R; Hill, Hannah E et al. (2018) Preparation and characterization of metal-substituted carotenoid cleavage oxygenases. J Biol Inorg Chem 23:887-901
Jacques, Benoit; Coinçon, Mathieu; Sygusch, Jurgen (2018) Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases. J Biol Chem 293:7737-7753
Fuller, Franklin D; Gul, Sheraz; Chatterjee, Ruchira et al. (2017) Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers. Nat Methods 14:443-449
Wangkanont, Kittikhun; Winton, Valerie J; Forest, Katrina T et al. (2017) Conformational Control of UDP-Galactopyranose Mutase Inhibition. Biochemistry 56:3983-3992
VanderLinden, Ryan T; Hemmis, Casey W; Yao, Tingting et al. (2017) Structure and energetics of pairwise interactions between proteasome subunits RPN2, RPN13, and ubiquitin clarify a substrate recruitment mechanism. J Biol Chem 292:9493-9504
Song, Lingshuang; Yang, Lin; Meng, Jie et al. (2017) Thermodynamics of Hydrophobic Amino Acids in Solution: A Combined Experimental-Computational Study. J Phys Chem Lett 8:347-351
Orlova, Natalia; Gerding, Matthew; Ivashkiv, Olha et al. (2017) The replication initiator of the cholera pathogen's second chromosome shows structural similarity to plasmid initiators. Nucleic Acids Res 45:3724-3737
Firestone, Ross S; Cameron, Scott A; Karp, Jerome M et al. (2017) Heat Capacity Changes for Transition-State Analogue Binding and Catalysis with Human 5'-Methylthioadenosine Phosphorylase. ACS Chem Biol 12:464-473
Arturo, Emilia C; Gupta, Kushol; Héroux, Annie et al. (2016) First structure of full-length mammalian phenylalanine hydroxylase reveals the architecture of an autoinhibited tetramer. Proc Natl Acad Sci U S A 113:2394-9
McMillan, Brian J; Tibbe, Christine; Jeon, Hyesung et al. (2016) Electrostatic Interactions between Elongated Monomers Drive Filamentation of Drosophila Shrub, a Metazoan ESCRT-III Protein. Cell Rep 16:1211-1217

Showing the most recent 10 out of 167 publications