This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. The project focuses on enhancing the computational resources of VCell by enabling execution of simulation jobs on compute resources other than the compute clusters at UCHC dedicated to the web-based version of VCell. This will be achieved by implementing support for three alternate forms of solver deployments and simulation dispatching: (i) grid computing via the OpenScienceGrid, (ii) user-owned/controlled clusters, and (iii) directly on the client computer.
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| Schaff, James C; Gao, Fei; Li, Ye et al. (2016) Numerical Approach to Spatial Deterministic-Stochastic Models Arising in Cell Biology. PLoS Comput Biol 12:e1005236 |
| Semenova, Irina; Ikeda, Kazuho; Resaul, Karim et al. (2014) Regulation of microtubule-based transport by MAP4. Mol Biol Cell 25:3119-32 |
| Novak, Igor L; Slepchenko, Boris M (2014) A conservative algorithm for parabolic problems in domains with moving boundaries. J Comput Phys 270:203-213 |
| Michalski, Paul J (2014) First demonstration of bistability in CaMKII, a memory-related kinase. Biophys J 106:1233-5 |
| Azeloglu, Evren U; Hardy, Simon V; Eungdamrong, Narat John et al. (2014) Interconnected network motifs control podocyte morphology and kidney function. Sci Signal 7:ra12 |
| Ditlev, Jonathon A; Mayer, Bruce J; Loew, Leslie M (2013) There is more than one way to model an elephant. Experiment-driven modeling of the actin cytoskeleton. Biophys J 104:520-32 |
| Acker, Corey D; Loew, Leslie M (2013) Characterization of voltage-sensitive dyes in living cells using two-photon excitation. Methods Mol Biol 995:147-60 |
| Loew, Leslie M; Hell, Stefan W (2013) Superresolving dendritic spines. Biophys J 104:741-3 |
| Blasius, T Lynne; Reed, Nathan; Slepchenko, Boris M et al. (2013) Recycling of kinesin-1 motors by diffusion after transport. PLoS One 8:e76081 |
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