The proposed Resource (Neuroimaging Analysis Center or NAC) is a computer science-based, application oriented image processing laboratory that is solidly established in a rich clinical environment. The proposal represents a continuation and expansion of our ongoing efforts in the algorithmic domain, in basic and clinical applications. We propose to expand our high performance computing facility, focusing on neuroimaging applications in the form of collaborative projects as well as providing training and educational support for the local, national and internal scientific community. We plan to disseminate the scientific and clinical tools developed within the NAC and make it available for a wide range of application within and outside of the field of clinical neurosciences and neurosurgery. The main focus of the NAC is to develop post-processing methods for digital medical imaging data and to use these algorithms for clinical applications. The ultimate goal of the work conducted in the NAC is to have fully automated identification of relevant structures from the images for quantitative morphologic analysis of the brain and for visualization of these structures to be applied to: (1) interactive visualization during neurosurgery; (2) the identification and follow-up of white matter lesions in multiple sclerosis (MS); (3) the identification, quantification, visualization and follow-up of morphometric anomalies in Alzheimer's disease, (4) the identification, quantification, visualization and follow- up of morphometric anomalies in Schizophrenia. Three basic algorithmic approaches (segmentation, registration and visualization) are the Core Technologies which will be advanced by the scientists of the Resource. The continuously expanding and improving interactive digital brain atlas will serve as a basis for many of the algorithms and applications, as well as for teaching purposes. These Core Technologies will be utilized for all Collaborative and Service Projects. The existing and continuously upgraded High Performance Computing (HPC) facilities of the Center are equally important as in infrastructure hardware resource. Algorithms that are used extensively in the day-to-day operation of the NAC will be ported into state of the art cluster facilities. This will significantly speed up the execution of algorithms and will improve availability and utilization of the resources. In the context of this proposal the presented primary applications of the technology to schizophrenia, multiple sclerosis, Alzheimer's disease and image guidance in neurosurgery will be the major foci for three basic approaches to the extraction of information from images: quantitative manual, quantitative automated, and qualitative. These fundamental methods will also be utilized in the planning and simulation of neurosurgical procedures, many of which ultimately take place in the operating room or within an open-MRI system. These major efforts along with and other, smaller, projects represent the foundation of the proposed NAC which will focus, expand and enhanced the existing resources available for a wide range of applications. The NAC will provide a vehicle to the dissemination of the results of our research to a larger user community.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
3P41RR013218-04S1
Application #
6500920
Study Section
Special Emphasis Panel (ZRG7 (88))
Program Officer
Levy, Abraham
Project Start
1998-09-30
Project End
2003-07-31
Budget Start
2001-08-01
Budget End
2002-07-31
Support Year
4
Fiscal Year
2001
Total Cost
$746,435
Indirect Cost
Name
Brigham and Women's Hospital
Department
Type
DUNS #
071723621
City
Boston
State
MA
Country
United States
Zip Code
02115
Saito, Yukiko; Kubicki, Marek; Koerte, Inga et al. (2018) Impaired white matter connectivity between regions containing mirror neurons, and relationship to negative symptoms and social cognition, in patients with first-episode schizophrenia. Brain Imaging Behav 12:229-237
Gallardo, Guillermo; Wells 3rd, William; Deriche, Rachid et al. (2018) Groupwise structural parcellation of the whole cortex: A logistic random effects model based approach. Neuroimage 170:307-320
Ratner, Vadim; Gao, Yi; Lee, Hedok et al. (2017) Cerebrospinal and interstitial fluid transport via the glymphatic pathway modeled by optimal mass transport. Neuroimage 152:530-537
Sastry, Rahul; Bi, Wenya Linda; Pieper, Steve et al. (2017) Applications of Ultrasound in the Resection of Brain Tumors. J Neuroimaging 27:5-15
Chen, Yongxin; Georgiou, Tryphon T; Ning, Lipeng et al. (2017) Matricial Wasserstein-1 Distance. IEEE Control Syst Lett 1:14-19
Niethammer, Marc; Pohl, Kilian M; Janoos, Firdaus et al. (2017) ACTIVE MEAN FIELDS FOR PROBABILISTIC IMAGE SEGMENTATION: CONNECTIONS WITH CHAN-VESE AND RUDIN-OSHER-FATEMI MODELS. SIAM J Imaging Sci 10:1069-1103
Chen, Yongxin; Cruz, Filemon Dela; Sandhu, Romeil et al. (2017) Pediatric Sarcoma Data Forms a Unique Cluster Measured via the Earth Mover's Distance. Sci Rep 7:7035
Schabdach, Jenna; Wells 3rd, William M; Cho, Michael et al. (2017) A Likelihood-Free Approach for Characterizing Heterogeneous Diseases in Large-Scale Studies. Inf Process Med Imaging 10265:170-183
Wachinger, Christian; Brennan, Matthew; Sharp, Greg C et al. (2017) Efficient Descriptor-Based Segmentation of Parotid Glands With Nonlocal Means. IEEE Trans Biomed Eng 64:1492-1502
Chen, Yongxin; Georgiou, Tryphon; Pavon, Michele et al. (2017) Robust transport over networks. IEEE Trans Automat Contr 62:4675-4682

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