The Rosenstiel School of Marine and Atmospheric Science has high capacity sequencing using an ABI 3730 (currently 48 capillaries will be upgraded to 96 capillaries) and genotyping using xMAP technology by Luminex, system. These systems are linked to robotics for high-throughput genomic analyses. Additionally, the facilities offer high capacity Q-PCR, gel electrophoresis, and thermal cycling. Support of the Genomics Core Facilities will allow us to train, analyze, and provide technical support to the Center for Ocean and Human Health researchers at a minimal cost (cost of reagents). In so doing, the investigators can apply modern high-throughput genomic techniques to better understand the biology, physiology and evolution of toxin producing algae and the distribution and occurrence of anthropogenic bacteria and viruses in marine habitats.
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| Donahue, Allison; Feng, Zhixuan; Kelly, Elizabeth et al. (2017) Significance of beach geomorphology on fecal indicator bacteria levels. Mar Pollut Bull 121:160-167 |
| Feng, Zhixuan; Reniers, Ad; Haus, Brian K et al. (2016) Wave energy level and geographic setting correlate with Florida beach water quality. Mar Pollut Bull 104:54-60 |
| Bonilla, J Alfredo; Bonilla, Tonya D; Abdelzaher, Amir M et al. (2015) Quantification of Protozoa and Viruses from Small Water Volumes. Int J Environ Res Public Health 12:7118-32 |
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| Feng, Zhixuan; Reniers, Ad; Haus, Brian K et al. (2015) A predictive model for microbial counts on beaches where intertidal sand is the primary source. Mar Pollut Bull 94:37-47 |
| Whitman, Richard; Harwood, Valerie J; Edge, Thomas A et al. (2014) Microbes in Beach Sands: Integrating Environment, Ecology and Public Health. Rev Environ Sci Biotechnol 13:329-368 |
| Phillips, Matthew C; Feng, Zhixuan; Vogel, Laura J et al. (2014) Microbial release from seeded beach sediments during wave conditions. Mar Pollut Bull 79:114-22 |
| Hernandez, Rafael J; Hernandez, Yasiel; Jimenez, Nasly H et al. (2014) Effects of full-scale beach renovation on fecal indicator levels in shoreline sand and water. Water Res 48:579-91 |
| Schriewer, Alexander; Goodwin, Kelly D; Sinigalliano, Christopher D et al. (2013) Performance evaluation of canine-associated Bacteroidales assays in a multi-laboratory comparison study. Water Res 47:6909-20 |
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