Overview The laboratory for the Virus Imaging Core is currently located on the third floor of the Tarry Building on the Chicago Campus of Northwestern University. The laboratory will relocate to the state-of-the-art Lurie Biomedical Research Building in the fall of 2007. The Hope laboratory currently houses 3 DeltaVision RT deconvolution microscopes. Importantly, these microscopes are in a biocontained room located close to our HIV culture facility, allowing the safe observation of infectious HIV. Deconvolution microscopy uses computer processing to compensate for distortion caused by the optical path. Through the observation of fluorescent beads, an algorithm is developed which corrects the distortion caused by lenses and removes out-of-focus light163. The associated digital camera detects weak signals enabling great sensitivity and resolution, which is optimal for imaging viral particles in cells. Image capture with minimal illumination minimizes photobleaching and avoids phototoxicity, which can stress the cells during live cell observation. Two stand-alone workstations contain the complete Softworx software for deconvolutions and image processing, and off line image processing facilitates efficient instrument use. The systems are configured with filter sets allowing imaging of different types of fluorescent proteins including blue, cyan, green, yellow, and red fluorescent proteins. This permits simultaneous imaging of up to four different fluorescent proteins in live cells and 5 different fluors in fixed cell imaging. Importantly, two of these microscopes have environmental control chambers, including 5% CO2, allowing extended live cell timelapse microscopy. One of the microscopes with environmental control in equipped with a Photonics Mosaic digital diaphragm that allows precise sample illumination for photobleaching and photoactivation experiments. Additionally, this system has an ultrasensitive digital camera allowing maximal photon detection and signal amplification.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Specialized Center (P50)
Project #
5P50GM082545-04
Application #
8137192
Study Section
Special Emphasis Panel (ZRG1)
Project Start
Project End
Budget Start
2010-08-01
Budget End
2011-07-31
Support Year
4
Fiscal Year
2010
Total Cost
$340,346
Indirect Cost
Name
University of Utah
Department
Type
DUNS #
009095365
City
Salt Lake City
State
UT
Country
United States
Zip Code
84112
Wang, Haoqing; Barnes, Christopher O; Yang, Zhi et al. (2018) Partially Open HIV-1 Envelope Structures Exhibit Conformational Changes Relevant for Coreceptor Binding and Fusion. Cell Host Microbe 24:579-592.e4
Pastuzyn, Elissa D; Day, Cameron E; Kearns, Rachel B et al. (2018) The Neuronal Gene Arc Encodes a Repurposed Retrotransposon Gag Protein that Mediates Intercellular RNA Transfer. Cell 172:275-288.e18
Wagner, Jonathan M; Christensen, Devin E; Bhattacharya, Akash et al. (2018) General Model for Retroviral Capsid Pattern Recognition by TRIM5 Proteins. J Virol 92:
Donaldson, G P; Ladinsky, M S; Yu, K B et al. (2018) Gut microbiota utilize immunoglobulin A for mucosal colonization. Science 360:795-800
Bailey, Lucas J; Sheehy, Kimberly M; Dominik, Pawel K et al. (2018) Locking the Elbow: Improved Antibody Fab Fragments as Chaperones for Structure Determination. J Mol Biol 430:337-347
Pak, Alexander J; Voth, Gregory A (2018) Advances in coarse-grained modeling of macromolecular complexes. Curr Opin Struct Biol 52:119-126
Redman, Joseph S; Francis, J Nicholas; Marquardt, Robert et al. (2018) Pharmacokinetic and Chemical Synthesis Optimization of a Potent d-Peptide HIV Entry Inhibitor Suitable for Extended-Release Delivery. Mol Pharm 15:1169-1179
Larsen, Kevin P; Mathiharan, Yamuna Kalyani; Kappel, Kalli et al. (2018) Architecture of an HIV-1 reverse transcriptase initiation complex. Nature 557:118-122
Carter, Stephen D; Mageswaran, Shrawan K; Farino, Zachary J et al. (2018) Distinguishing signal from autofluorescence in cryogenic correlated light and electron microscopy of mammalian cells. J Struct Biol 201:15-25
Shepherd, Jason D (2018) Arc - An endogenous neuronal retrovirus? Semin Cell Dev Biol 77:73-78

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