Our long-term goal is to determine how cellular transcription factors interface with the HSV-1 genome toachieve latent infections and to reactivate the genome. Eukaryotic genomes are regulated via post-translational modifications and alterations to histones and higher order chromatin structures. Because HSV-1replicates in a eukaryotic milieu, the virus is subject to chromatin-mediated effects. Our previous workdemonstrated that nucleosomes are present and activation-linked histone modifications are induced on theHSV-1 genome during acute infections. The objective of the current proposal is to investigate the role ofchromatin in regulation of HSV-1 acute infection, latency, and reactivation. We will explore how dynamicchanges between euchromatin and herochromatin regulate HSV-1. Our specific goals are to determinewhether specific cellular histone modification enzymes, histone variants, and ATP-dependent remodelingcomplexes promote acute HSV-1 infection and reactivation, and whether cellular heterochromaticmechanisms repress the genome during latency. We will also investigate the presence of possiblechromatin-based insulators to buffer the expressed LAT region during latency, to prevent enchroachment ofsurrounding heterochromatin. The work will interface with each of the additional Projects in the Programthrough (1) mapping of histone modifications on HSV-1 microarrays (with Project 1), (2) identification ofchromatin boundaries (with Project 2), examining the role of histone modifications in HSV^-1 regulation in thePC12 in vitro system (with Project 4). Our studies will provide the first comprehensive analysis of chromatinin stages of the HSV-1 viral life cycle. It is noteworthy that chromatin regulation has become a focus ofstrategies for intervention in human diseases. The research proposed here will reveal criticai Chromatisimodulating enzymes for HSV-1 latency and reactivation and in this way will provide new interventionpossibilities.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Specialized Center (P50)
Project #
2P50NS033768-20A1
Application #
7314943
Study Section
Special Emphasis Panel (ZNS1-SRB-M (43))
Project Start
Project End
Budget Start
2007-06-01
Budget End
2008-03-31
Support Year
20
Fiscal Year
2007
Total Cost
$249,007
Indirect Cost
Name
University of Pennsylvania
Department
Type
DUNS #
042250712
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Oh, Jaewook; Sanders, Iryna F; Chen, Eric Z et al. (2015) Genome wide nucleosome mapping for HSV-1 shows nucleosomes are deposited at preferred positions during lytic infection. PLoS One 10:e0117471
Sanders, Iryna; Boyer, Mark; Fraser, Nigel W (2015) Early nucleosome deposition on, and replication of, HSV DNA requires cell factor PCNA. J Neurovirol 21:358-69
Brinkman, Kerry K; Mishra, Prakhar; Fraser, Nigel W (2013) The half-life of the HSV-1 1.5-kb LAT intron is similar to the half-life of the 2.0-kb LAT intron. J Neurovirol 19:102-8
Volcy, Ketna; Fraser, Nigel W (2013) DNA damage promotes herpes simplex virus-1 protein expression in a neuroblastoma cell line. J Neurovirol 19:57-64
Millhouse, Scott; Wang, Xiaohe; Fraser, Nigel W et al. (2012) Direct evidence that HSV DNA damaged by ultraviolet (UV) irradiation can be repaired in a cell type-dependent manner. J Neurovirol 18:231-43
Oh, Jaewook; Ruskoski, Nicholas; Fraser, Nigel W (2012) Chromatin assembly on herpes simplex virus 1 DNA early during a lytic infection is Asf1a dependent. J Virol 86:12313-21
Jiang, Xianzhi; Chentoufi, Aziz Alami; Hsiang, Chinhui et al. (2011) The herpes simplex virus type 1 latency-associated transcript can protect neuron-derived C1300 and Neuro2A cells from granzyme B-induced apoptosis and CD8 T-cell killing. J Virol 85:2325-32
Millhouse, Scott; Su, Ying-Hsiu; Zhang, Xianchao et al. (2010) Evidence that herpes simplex virus DNA derived from quiescently infected cells in vitro, and latently infected cells in vivo, is physically damaged. J Neurovirol 16:384-98
Smith, Sheryl T; Wickramasinghe, Priyankara; Olson, Andrew et al. (2009) Genome wide ChIP-chip analyses reveal important roles for CTCF in Drosophila genome organization. Dev Biol 328:518-28