A novel strategy is proposed to identify and initially characterize genes and interacting groups of genes which determine adult lifespan in the nematode C. elegans. The F1 progeny of crosses between C. elegans strains (e.g., N2xBO or N2xDH424) have lifespans similar to the parental strains, and yet F2's and derived inbred clones show increased variation in lifespans, which range from 70-160% of parental levels. This implies that multiple genes, polymorphic between these strains, determine C. elegans lifespan. We propose to characterize such genes by identifying alleles consistently present in the longest-lived recombinant inbred progeny of inter-strain crosses. Unique probes flanking those Tc1 transposons which are present in genomic DNA of the BO and DH424 strains, but absent from N2 and C12a, will be used to determine the source strain for homozygous regions of (N2 or C12a)x(BO or DH424) hybrid genomes. The allele ratio (- Tc1:+Tc1) must be 1:1 in the F1 heterozygotes, and any consistent shift between young worms at F1 and later generations would be attributed to reproductive selection favoring one allele. However, if a given allele ratio changes consistently between young adults and the longest-lived 5% of worms, both at the same generation (Fn greater than or equal to 12), this would indicate linkage between that polymorphic marker and a lifespan determining gene -- for which one of the two alleles conferred greater lifespan than the other. Polymerase chain reaction with multiplex primer sets, specific for sequences flanking mapped Tc1 elements in BO and/or DH424 DNA, will be used to analyze > 100 of the longest-surviving individual worms in such populations, to identify combinations of gene alleles which frequently co-segregate in long-lived worms. Comparison of these gene sets with those selected under conditions of hyperoxia or late fecundity, etc., will indicate the extent of overlap between the underlying genetic determinants for these traits. Identification of lifespan- modulating genes, and of alleles with differing contributions to longevity, will aid our understanding of the molecular mechanisms underlying senescence. In the long term, comparative studies of cognate genes in other species, including man, should reveal whether they share a common mechanism of senescence, and may implicate genetic interactions in the etiology of age-associated diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Research Project (R01)
Project #
5R01AG009413-04
Application #
2050787
Study Section
Molecular Cytology Study Section (CTY)
Project Start
1991-08-15
Project End
1996-07-31
Budget Start
1994-08-10
Budget End
1995-07-31
Support Year
4
Fiscal Year
1994
Total Cost
Indirect Cost
Name
University of Arkansas for Medical Sciences
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
City
Little Rock
State
AR
Country
United States
Zip Code
72205
Ayyadevara, S; Thaden, J J; Shmookler Reis, R J (2000) Discrimination of primer 3'-nucleotide mismatch by taq DNA polymerase during polymerase chain reaction. Anal Biochem 284:8-Nov
Ayyadevara, S; Thaden, J J; Shmookler Reis, R J (2000) Anchor polymerase chain reaction display: a high-throughput method to resolve, score, and isolate dimorphic genetic markers based on interspersed repetitive DNA elements. Anal Biochem 284:19-28
Cherkasova, V; Ayyadevara, S; Egilmez, N et al. (2000) Diverse Caenorhabditis elegans genes that are upregulated in dauer larvae also show elevated transcript levels in long-lived, aged, or starved adults. J Mol Biol 300:433-48
Nikitin, A G; Shmookler Reis, R J (1997) Role of transposable elements in age-related genomic instability. Genet Res 69:183-95
van Swinderen, B; Shook, D R; Ebert, R H et al. (1997) Quantitative trait loci controlling halothane sensitivity in Caenorhabditis elegans. Proc Natl Acad Sci U S A 94:8232-7
Shmookler Reis, R J; Ebert 2nd, R H (1996) Genetics of aging: current animal models. Exp Gerontol 31:69-81
Ebert 2nd, R H; Shammas, M A; Sohal, B H et al. (1996) Defining genes that govern longevity in Caenorhabditis elegans. Dev Genet 18:131-43
Egilmez, N K; Ebert 2nd, R H; Shmookler Reis, R J (1995) Strain evolution in Caenorhabditis elegans: transposable elements as markers of interstrain evolutionary history. J Mol Evol 40:372-81
Egilmez, N K; Shmookler Reis, R J (1994) Age-dependent somatic excision of transposable element Tc1 in Caenorhabditis elegans. Mutat Res 316:17-24
Ebert 2nd, R H; Cherkasova, V A; Dennis, R A et al. (1993) Longevity-determining genes in Caenorhabditis elegans: chromosomal mapping of multiple noninteractive loci. Genetics 135:1003-10