The overall goal of this project is the development of a digital brain image database (BRAID) that integrates image-processing and visualization capabilities, the statistical analysis of spatial and clinical data, and management of digital brain atlases, all accessible from a common user interface. The integration of these components is critical to BRAID's success in deriving clinically meaningful associations between the structure and function of the human brain. We envision BRAID as a platform for the analysis of image-based clinical trials (IBCT's), three of which we are currently analyzing. Our preliminary results demonstrate the need for efficient automated segmentation of image data for large numbers of subjects, for powerful statistical analysis of these data, and for atlases that reflect the pathophysiology being investigated in a given IBCT. In the IBCT's we are analyzing, cortical and white-matter lesions are central to the structure-function hypotheses being addressed. Toward these ends, we propose three specific aims to extend BRAID's functionality: development of statistical algorithms for automated segmentation of brain lesions, development of Bayesian methods for multivariate atlas-based lesion-deficit analysis, augmented atlas that will include certain white-matter structures in addition to cortical and subcortical structures. These extensions build on the strengths of BRAID's morphologically factored image representation developed in the first phase of this grant. We will test these extensions to BRAID by applying our methods to data sets from the Psychopathology of Frontal Lobe Injury in Childhood (FLIC) study, the Baltimore Longitudinal Study on Aging (BLSA), and the Cardiovascular Health Study (CHS). The BLSA and CHS are large-scale epidemiological image-based clinical trials, the former a 9-year longitudinal study with annual MR and neuropsychiatric data on 180 subjects, the latter an NHLBI sponsored project with extensive demographic, functional, and MR data on over 3,600 participants. The FLIC study is collecting brain MR and extensive neuropsychiatric data on 100 children after traumatic brain injury. In analyzing these data, and data from other IBCT's, BRAID will increase our understanding of the functional organization of the human brain.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Research Project (R01)
Project #
7R01AG013743-07
Application #
6678264
Study Section
Special Emphasis Panel (ZDA1-MXS-M (28))
Program Officer
Wagster, Molly V
Project Start
1995-09-30
Project End
2003-07-31
Budget Start
2003-03-01
Budget End
2003-07-31
Support Year
7
Fiscal Year
2001
Total Cost
$272,107
Indirect Cost
Name
University of Pennsylvania
Department
Radiation-Diagnostic/Oncology
Type
Schools of Medicine
DUNS #
042250712
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Chen, Rong; Krejza, Jaroslaw; Arkuszewski, Michal et al. (2017) Brain morphometric analysis predicts decline of intelligence quotient in children with sickle cell disease: A preliminary study. Adv Med Sci 62:151-157
Chen, Rong; Herskovits, Edward H (2015) Examining the multifactorial nature of a cognitive process using Bayesian brain-behavior modeling. Comput Med Imaging Graph 41:117-25
Chen, Rong; Herskovits, Edward H (2012) Graphical model based multivariate analysis (GAMMA): an open-source, cross-platform neuroimaging data analysis software package. Neuroinformatics 10:119-27
Jiao, Yun; Chen, Rong; Ke, Xiaoyan et al. (2012) Single nucleotide polymorphisms predict symptom severity of autism spectrum disorder. J Autism Dev Disord 42:971-83
Chen, Rong; Resnick, Susan M; Davatzikos, Christos et al. (2012) Dynamic Bayesian network modeling for longitudinal brain morphometry. Neuroimage 59:2330-8
Chen, Rong; Jiao, Yun; Herskovits, Edward H (2011) Structural MRI in autism spectrum disorder. Pediatr Res 69:63R-8R
Jiao, Y; Chen, R; Ke, X et al. (2011) Predictive models for subtypes of autism spectrum disorder based on single-nucleotide polymorphisms and magnetic resonance imaging. Adv Med Sci 56:334-42
Chen, Rong; Herskovits, Edward H (2010) Machine-learning techniques for building a diagnostic model for very mild dementia. Neuroimage 52:234-44
Chen, Rong; Herskovits, Edward H (2010) Voxel-based Bayesian lesion-symptom mapping. Neuroimage 49:597-602
Jiao, Yun; Chen, Rong; Ke, Xiaoyan et al. (2010) Predictive models of autism spectrum disorder based on brain regional cortical thickness. Neuroimage 50:589-99

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