The work proposed is focused on MSG, which is a group of variable surface antigens of the pathogenic fungus, P. carinii. Surface antigens such as MSG are of fundamental interest because they function at the host-pathogen interface. The importance of this interface to pathogenic microbes is illustrated by the complex genetic systems used by certain protozoa and bacteria to generate diversity on their surface. P. carinii MSG genes appear to endow this fungus with a similar capacity to vary its surface. The broad, long-term objectives of the research proposed are to characterize antigenic variation in P. carinii, to understand the genetic mechanism that controls it, and to study the relationship between antigenic variation and host-pathogen interactions. The experiments focus primarily on rat P. carinii because it is tractable. Studies on human P. carinii are also proposed. Hypotheses to be tested include (i) P. carinii use DNA recombination to change the MSG gene that is attached to a unique expression site. (ii) Changing this gene leads to a change in the MSG on the cell surface. (iii) P. carinii that infects humans has an MSG expression system similar to that in P.carinii that infects rats. The proposed research has the following four Specific Aims: 1. Determine the genetic basis for antigenic variation. 2. Analyze the dynamics and nature of MSG variation in the inoculated rat model. 3: Determine if the host immune response influences the frequency or nature of antigenic variation. 4. Analyze the MSG system in human P. carinii.
These Aims will be addressed using rats that are naturally infected, and rats that have been inoculated with a low dose of P. carinii. Human P. carinii will be obtained from patients. Molecular genetic and immunohistochemical tools will be used to study expression of MSG genes and proteins.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
2R01AI036701-05A1
Application #
6147592
Study Section
Special Emphasis Panel (ZRG1-AARR-4 (01))
Program Officer
Dixon (Dmid), Dennis M
Project Start
1995-08-01
Project End
2005-03-31
Budget Start
2000-04-01
Budget End
2001-03-31
Support Year
5
Fiscal Year
2000
Total Cost
$267,750
Indirect Cost
Name
University of Cincinnati
Department
Genetics
Type
Schools of Medicine
DUNS #
City
Cincinnati
State
OH
Country
United States
Zip Code
45221
Keely, Scott P; Stringer, James R (2009) Complexity of the MSG gene family of Pneumocystis carinii. BMC Genomics 10:367
Deitsch, Kirk W; Lukehart, Sheila A; Stringer, James R (2009) Common strategies for antigenic variation by bacterial, fungal and protozoan pathogens. Nat Rev Microbiol 7:493-503
Keely, Scott P; Linke, Michael J; Cushion, Melanie T et al. (2007) Pneumocystis murina MSG gene family and the structure of the locus associated with its transcription. Fungal Genet Biol 44:905-19
Keely, Scott P; Renauld, Hubert; Wakefield, Ann E et al. (2005) Gene arrays at Pneumocystis carinii telomeres. Genetics 170:1589-600
Keely, Scott P; Fischer, Jared M; Cushion, Melanie T et al. (2004) Phylogenetic identification of Pneumocystis murina sp. nov., a new species in laboratory mice. Microbiology 150:1153-65
Ambrose, H E; Keely, S P; Aliouat, E M et al. (2004) Expression and complexity of the PRT1 multigene family of Pneumocystis carinii. Microbiology 150:293-300
Schaffzin, Joshua K; Stringer, James R (2004) Expression of the Pneumocystis carinii major surface glycoprotein epitope is correlated with linkage of the cognate gene to the upstream conserved sequence locus. Microbiology 150:677-86
Keely, Scott P; Stringer, James R (2003) Sequence diversity of transcripts from Pneumocystis carinii gene families MSR and PRT1. J Eukaryot Microbiol 50 Suppl:627-8
Keely, Scott P; Cushion, Melanie T; Stringer, James R (2003) Diversity at the locus associated with transcription of a variable surface antigen of Pneumocystis carinii as an index of population structure and dynamics in infected rats. Infect Immun 71:47-60
Keely, Scott P; Fischer, Jared M; Stringer, James R (2003) Evolution and speciation of Pneumocystis. J Eukaryot Microbiol 50 Suppl:624-6

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