The goal of the proposed research is to understand at the molecular level, how chemokines and their receptors control leukocyte migration. These proteins are critical to the normal functioning of the immune system, but they are also involved in a large number of diseases including inflammation, atherosclerosis, and viral disease. Furthermore, it has been shown that chemokine receptors serve as obligate coreceptors for fusion of the human immuno-deficiency virus with leukocytes, and that viral infectivity can be inhibited by the ligands of the coreceptors. Thus there are a wide range of clinically important diseases motivating our studies of chemokine function. Our approach has been to combine structural and functional studies to understand how these proteins bind and signal through their receptors, and what molecular features confer receptor specificity. We will focus on the monocyte chemoattractant protein 1 and its receptor CCR2, fractalkine and its receptor CX3CR1, viral chemokine homologues, and human chemokine-viral receptor complexes. The objectives of this proposal are as follows: 1. Continue structure-function studies of MCP-1 and fractalkine to map residues involved in binding, chemotaxis, and activation of specific signaling pathways. 2. Identify residues involved in surface glycosaminoglycan presentation of MCP-1. Investigate the role of chemokine oligomerization on function. 3. Characterize the interaction between chemokines and extracellular domains of their receptors by NMR. 4. Express and characterize novel viral chemokines, and complexes between human chemokines and soluble viral receptors.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI037113-07
Application #
6510569
Study Section
Biophysical Chemistry Study Section (BBCB)
Program Officer
Winter, David B
Project Start
1994-12-01
Project End
2004-06-30
Budget Start
2002-07-01
Budget End
2003-06-30
Support Year
7
Fiscal Year
2002
Total Cost
$333,558
Indirect Cost
Name
University of California Berkeley
Department
Microbiology/Immun/Virology
Type
Schools of Arts and Sciences
DUNS #
094878337
City
Berkeley
State
CA
Country
United States
Zip Code
94704
Zheng, Yi; Han, Gye Won; Abagyan, Ruben et al. (2017) Structure of CC Chemokine Receptor 5 with a Potent Chemokine Antagonist Reveals Mechanisms of Chemokine Recognition and Molecular Mimicry by HIV. Immunity 46:1005-1017.e5
Gustavsson, Martin; Zheng, Yi; Handel, Tracy M (2016) Production of Chemokine/Chemokine Receptor Complexes for Structural Biophysical Studies. Methods Enzymol 570:233-60
Dyer, Douglas P; Salanga, Catherina L; Johns, Scott C et al. (2016) The Anti-inflammatory Protein TSG-6 Regulates Chemokine Function by Inhibiting Chemokine/Glycosaminoglycan Interactions. J Biol Chem 291:12627-40
Fox, Jamie C; Tyler, Robert C; Peterson, Francis C et al. (2016) Examination of Glycosaminoglycan Binding Sites on the XCL1 Dimer. Biochemistry 55:1214-25
Dyer, Douglas P; Salanga, Catherina L; Volkman, Brian F et al. (2016) The dependence of chemokine-glycosaminoglycan interactions on chemokine oligomerization. Glycobiology 26:312-26
Migliorini, Elisa; Thakar, Dhruv; Kühnle, Jens et al. (2015) Cytokines and growth factors cross-link heparan sulfate. Open Biol 5:
Kufareva, Irina; Salanga, Catherina L; Handel, Tracy M (2015) Chemokine and chemokine receptor structure and interactions: implications for therapeutic strategies. Immunol Cell Biol 93:372-83
Deshauer, Courtney; Morgan, Ashli M; Ryan, Eathen O et al. (2015) Interactions of the Chemokine CCL5/RANTES with Medium-Sized Chondroitin Sulfate Ligands. Structure 23:1066-77
Hanes, Melinda S; Salanga, Catherina L; Chowdry, Arnab B et al. (2015) Dual targeting of the chemokine receptors CXCR4 and ACKR3 with novel engineered chemokines. J Biol Chem 290:22385-97
Handel, Tracy Marie (2015) The Structure of a CXCR4:Chemokine Complex. Front Immunol 6:282

Showing the most recent 10 out of 61 publications