The process of apoptotic cell death is of fundamental importance for our understanding of the development, function, and regulation of the immune system. While the phenomenon of apoptosis is very well documented, virtually nothing was known regarding the biochemical events underlying the central mechanism of cell death until recently. In the past two years, a number of mammalian cysteine proteases have been identified that show homology to the C. elegans Ced-3 protein, which has been demonstrated to play a critical role in programmed cell death in the nematode. This set of proteases, the ICE/Ced-3 family, reside in most cells in an inactive form, and one or more of these becomes activated by proteolytic processing during apoptosis. The observation that inhibitors of these proteases can block several forms of apoptosis have led to the central hypothesis that the activation of one or more members of this family is responsible for mediating cell death in all forms of apoptosis. The investigator refers to this mechanism as the """"""""Executioner"""""""" and he will test the idea that members of this family are essential components. Based on preliminary studies, he proposes to address five specific aims in this project, all directed at delineating the activation, function, and regulation of these proteases during apoptotic cell death in lymphoid cells. Several of his approaches depend upon the use of cell-free systems he has developed in which normal nuclei are induced to undergo apoptotic changes when cultured with extracts from lymphoid cells. In his first aim, he will pursue his observation that cytochrome c induces apoptosis in his cell-free system by inducing the processing of the processing of the Ced-3-like proteases. In his second aim, he will examine how this cytochrome c is released from mitochondria, and whether there is a role for an upstream protease such as that induced by ligation of CD95. In his third aim, he will explore the role of the proteasome in activating and/or regulating critical Ced-3-subfamily proteases, or other members of the ICE/Ced-family. In the fourth aim he will examine the changes in subcellular localization, especially nuclear, upon activation of these proteases. Finally, in the fifth aim, the investigator will examine the function of a potent anti-apoptotic protein, Bcl-2, in terms of its effects on the activation, function, and localization of ICE/Ced-3 family proteases. Once characterized in detail, the activation of the critical proteases will eventually serve as a biochemical thread by which to trace the molecular events that begin at the surface and result in cell death in the immune system.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI040646-03
Application #
2887351
Study Section
Allergy and Immunology Study Section (ALY)
Program Officer
Quill, Helen R
Project Start
1997-05-01
Project End
2002-04-30
Budget Start
1999-05-01
Budget End
2000-04-30
Support Year
3
Fiscal Year
1999
Total Cost
Indirect Cost
Name
La Jolla Institute
Department
Type
DUNS #
603880287
City
La Jolla
State
CA
Country
United States
Zip Code
92037
Mitchell, Gabriel; Cheng, Mandy I; Chen, Chen et al. (2018) Listeria monocytogenes triggers noncanonical autophagy upon phagocytosis, but avoids subsequent growth-restricting xenophagy. Proc Natl Acad Sci U S A 115:E210-E217
Cunha, Larissa D; Yang, Mao; Carter, Robert et al. (2018) LC3-Associated Phagocytosis in Myeloid Cells Promotes Tumor Immune Tolerance. Cell 175:429-441.e16
Moretti, Julien; Roy, Soumit; Bozec, Dominique et al. (2017) STING Senses Microbial Viability to Orchestrate Stress-Mediated Autophagy of the Endoplasmic Reticulum. Cell 171:809-823.e13
Heckmann, Bradlee L; Boada-Romero, Emilio; Cunha, Larissa D et al. (2017) LC3-Associated Phagocytosis and Inflammation. J Mol Biol 429:3561-3576
Galluzzi, Lorenzo; Baehrecke, Eric H; Ballabio, Andrea et al. (2017) Molecular definitions of autophagy and related processes. EMBO J 36:1811-1836
Park, Sunmin; Buck, Michael D; Desai, Chandni et al. (2016) Autophagy Genes Enhance Murine Gammaherpesvirus 68 Reactivation from Latency by Preventing Virus-Induced Systemic Inflammation. Cell Host Microbe 19:91-101
Lu, Qun; Yokoyama, Christine C; Williams, Jesse W et al. (2016) Homeostatic Control of Innate Lung Inflammation by Vici Syndrome Gene Epg5 and Additional Autophagy Genes Promotes Influenza Pathogenesis. Cell Host Microbe 19:102-13
Joo, Joung Hyuck; Wang, Bo; Frankel, Elisa et al. (2016) The Noncanonical Role of ULK/ATG1 in ER-to-Golgi Trafficking Is Essential for Cellular Homeostasis. Mol Cell 62:491-506
Goodall, Megan L; Fitzwalter, Brent E; Zahedi, Shadi et al. (2016) The Autophagy Machinery Controls Cell Death Switching between Apoptosis and Necroptosis. Dev Cell 37:337-349
Green, D R; Oguin, T H; Martinez, J (2016) The clearance of dying cells: table for two. Cell Death Differ 23:915-26

Showing the most recent 10 out of 84 publications